Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-35P-201ENST00000384530 107 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 HMGB1P17-201ENST00000403495 628 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 AC007742.1-201ENST00000425789 329 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 AC000111.3-201ENST00000433478 193 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 ELOCP26-201ENST00000436067 329 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 RPL26P6-201ENST00000440913 438 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 LARP1BP2-201ENST00000486594 519 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 AC103851.1-201ENST00000506833 274 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 AC113420.1-201ENST00000507903 571 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.98□□□□□ -2.25
IFT140Q96RY7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.98□□□□□ -2.25
IFT140Q96RY7 AP001269.3-201ENST00000588718 329 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.98□□□□□ -2.25
IFT140Q96RY7 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 AL138963.2-201ENST00000605137 226 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 AL355802.3-201ENST00000607571 545 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 AP003485.1-201ENST00000625093 753 ntBASIC0.98□□□□□ -2.25
IFT140Q96RY7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.97□□□□□ -2.25
IFT140Q96RY7 RNU6-543P-201ENST00000362576 108 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.97□□□□□ -2.25
IFT140Q96RY7 AC092047.1-201ENST00000424997 240 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 MED14P1-201ENST00000430517 648 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.97□□□□□ -2.25
IFT140Q96RY7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.97□□□□□ -2.25
IFT140Q96RY7 AL096803.2-201ENST00000450032 677 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.97□□□□□ -2.25
IFT140Q96RY7 RNU6-229P-201ENST00000516614 102 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
IFT140Q96RY7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.97□□□□□ -2.25
IFT140Q96RY7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.97□□□□□ -2.25
IFT140Q96RY7 AL022067.1-201ENST00000602426 454 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 AC023932.2-201ENST00000603176 175 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 AP003973.1-201ENST00000604639 691 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 AC092192.1-201ENST00000633154 1018 ntBASIC0.97□□□□□ -2.25
IFT140Q96RY7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
IFT140Q96RY7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 SNORA25.8-201ENST00000364831 128 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 RNU6-217P-201ENST00000384164 104 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 MIR135A2-201ENST00000384854 100 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 NDUFS5P1-201ENST00000405668 289 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 RNU2-43P-201ENST00000410306 190 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 RNU2-63P-201ENST00000410792 194 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.96□□□□□ -2.26
IFT140Q96RY7 RPL30P6-201ENST00000475925 342 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 RNU6-1256P-201ENST00000516539 103 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AC004217.3-201ENST00000551552 878 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AC233702.2-202ENST00000562547 291 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AC012435.1-202ENST00000568772 240 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AC007151.1-201ENST00000572774 483 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AC243829.6-201ENST00000612652 106 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 DUSP12P1-201ENST00000612874 516 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AC067863.3-201ENST00000624172 122 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AP003400.6-201ENST00000624698 740 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AC005832.2-201ENST00000538921 1430 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 MTND5P30-201ENST00000452896 1731 ntBASIC0.96□□□□□ -2.26
IFT140Q96RY7 AP000776.1-201ENST00000530032 1663 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 RNU6-748P-201ENST00000384648 107 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 MIR518A2-201ENST00000384966 87 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 RNU2-47P-201ENST00000410649 186 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 USP9YP33-201ENST00000412220 421 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 RPS24P7-201ENST00000416921 246 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.95□□□□□ -2.26
IFT140Q96RY7 AL512637.2-201ENST00000431287 1256 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 USP9YP35-201ENST00000435696 412 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 RPL26P9-201ENST00000457466 433 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.95□□□□□ -2.26
IFT140Q96RY7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.95□□□□□ -2.26
IFT140Q96RY7 AC124947.2-202ENST00000552735 133 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 MIR4765-201ENST00000585007 77 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.95□□□□□ -2.26
IFT140Q96RY7 AL031176.1-201ENST00000604554 466 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 AL161729.4-201ENST00000604650 476 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 AC007349.4-201ENST00000608114 532 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 AL138478.1-201ENST00000612252 832 ntBASIC0.95□□□□□ -2.26
IFT140Q96RY7 AC073544.1-201ENST00000600110 1595 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 Y_RNA.294-201ENST00000364916 102 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 RNU6-891P-201ENST00000384280 111 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 BEND7P1-201ENST00000422058 457 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 FTH1P12-201ENST00000432137 551 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.94□□□□□ -2.26
IFT140Q96RY7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.94□□□□□ -2.26
IFT140Q96RY7 AC008379.1-201ENST00000463655 464 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 RNU6-362P-201ENST00000516736 90 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 AC079610.2-201ENST00000604818 690 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.94□□□□□ -2.26
IFT140Q96RY7 Z99571.1-201ENST00000636677 394 ntBASIC0.94□□□□□ -2.26
IFT140Q96RY7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.94□□□□□ -2.26
IFT140Q96RY7 RNU6-1339P-201ENST00000363574 91 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 SNORA40.19-201ENST00000390846 128 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 FTH1P15-201ENST00000406984 280 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 RNU2-15P-201ENST00000410692 191 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 FABP5P14-201ENST00000437273 393 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 RNA5SP57-201ENST00000459463 123 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 AL049874.1-201ENST00000489560 388 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 SNORA4.4-201ENST00000515921 135 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 SNORA44.1-201ENST00000517031 108 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 ZNF705CP-201ENST00000530515 889 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 CR383656.7-201ENST00000548164 174 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms