Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SNORD9-201ENST00000362566 104 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 RNY4P14-201ENST00000363656 96 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 RNA5SP51-201ENST00000364750 119 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 Y_RNA.450-201ENST00000384198 113 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 MIR518D-201ENST00000385014 87 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 SNORA16.2-201ENST00000390991 127 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AL122016.1-201ENST00000403365 367 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 RNA5SP274-201ENST00000410484 108 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 HMGN2P35-201ENST00000412164 270 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AL451074.5-201ENST00000415894 435 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AC016831.2-201ENST00000417179 352 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 ARL5AP1-201ENST00000418991 388 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 EIF1P1-201ENST00000421436 341 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 PGBD4P6-201ENST00000421501 610 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 USP9YP18-201ENST00000425912 695 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AL121601.2-201ENST00000438019 707 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 RPS29P6-201ENST00000438196 145 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 RPL23AP58-201ENST00000440453 469 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 NUTF2P7-201ENST00000453086 375 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 RNU7-167P-201ENST00000459160 62 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 snoU109.2-201ENST00000459316 135 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 FAM133DP-201ENST00000464802 691 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AC116655.1-201ENST00000508324 901 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AC146944.4-201ENST00000602697 718 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 U6atac.1-201ENST00000616025 117 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AP003400.5-201ENST00000624827 617 ntBASIC2.97□□□□□ -1.93
NR1H4Q96RI1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NR1H4Q96RI1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC004520.1-201ENST00000608362 1413 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 RNA5SP197-201ENST00000363357 119 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 RNU6-1090P-201ENST00000364065 94 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 RNU6-384P-201ENST00000364900 104 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 RNU1-109P-201ENST00000383960 147 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 U8.11-201ENST00000384699 133 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 U8.12-201ENST00000384701 133 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 RN7SKP263-201ENST00000411194 309 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 C8orf59P1-201ENST00000429930 303 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 MTND1P4-201ENST00000435196 415 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 UBE2V1P8-201ENST00000437166 265 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC009296.1-201ENST00000443146 155 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 U8.18-201ENST00000459285 133 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 FCF1P8-201ENST00000510322 597 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC114781.4-201ENST00000513707 639 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 RNU1-86P-201ENST00000516108 154 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 RNU1-107P-201ENST00000516617 154 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC069113.1-201ENST00000517763 267 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 MTND1P35-201ENST00000526739 508 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC005476.1-201ENST00000554427 397 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC136624.4-201ENST00000573044 370 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 MIR5583-1-201ENST00000580941 59 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC020895.1-201ENST00000595362 272 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC005261.5-201ENST00000596280 355 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 AC068724.3-201ENST00000625906 87 ntBASIC2.96□□□□□ -1.94
NR1H4Q96RI1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.96□□□□□ -1.94
NR1H4Q96RI1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.95□□□□□ -1.94
NR1H4Q96RI1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NR1H4Q96RI1 RNU6-858P-201ENST00000362436 107 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 RNU1-100P-201ENST00000365255 165 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.95□□□□□ -1.94
NR1H4Q96RI1 Y_RNA.453-201ENST00000384223 109 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 RNU6-72P-201ENST00000384285 79 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 MIR548F1-201ENST00000408667 84 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.95□□□□□ -1.94
NR1H4Q96RI1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.95□□□□□ -1.94
NR1H4Q96RI1 AC091286.1-201ENST00000431233 461 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 AL365400.1-201ENST00000431854 640 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 RPL21P10-201ENST00000463521 490 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 RN7SL633P-201ENST00000488974 297 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.95□□□□□ -1.94
NR1H4Q96RI1 RPL38P4-201ENST00000502376 214 ntBASIC2.95□□□□□ -1.94
NR1H4Q96RI1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.95□□□□□ -1.94
NR1H4Q96RI1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.95□□□□□ -1.94
NR1H4Q96RI1 MTND1P5-201ENST00000517906 940 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms