Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TXNP7-201ENST00000406296 293 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 RPL37P10-201ENST00000412884 288 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AL158050.1-201ENST00000416077 457 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 COX7BP2-201ENST00000437976 242 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC245102.2-201ENST00000448956 180 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 RPS29P29-201ENST00000456396 171 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC010409.1-201ENST00000487382 476 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 RPS23P4-201ENST00000487908 423 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 PTP4A1P4-201ENST00000512479 322 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 SNORA31.17-201ENST00000516953 127 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC027807.1-201ENST00000559921 996 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC138915.2-201ENST00000569776 97 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 MIR4421-201ENST00000578133 69 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC023043.2-201ENST00000589678 1026 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AL161798.1-201ENST00000604630 131 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AC103810.9-201ENST00000606688 112 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 AL022345.1-201ENST00000607292 135 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 MIR1322-201ENST00000638013 71 ntBASIC0.83□□□□□ -2.28
AP1S3Q96PC3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
AP1S3Q96PC3 NACAP2-201ENST00000318548 624 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RNU6-28P-201ENST00000362378 107 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RNA5SP327-201ENST00000362494 101 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RNU6-1167P-201ENST00000363227 94 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RNU6-1078P-201ENST00000364522 103 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 SNORD14B-201ENST00000364533 90 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 SNORA25.8-201ENST00000364831 128 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RNU6-932P-201ENST00000391108 106 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC092427.1-201ENST00000439177 601 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RPL39P29-201ENST00000447779 157 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AL513124.1-201ENST00000450410 614 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RNU6-927P-201ENST00000516199 100 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 RNU6-714P-201ENST00000516963 103 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AP000763.2-201ENST00000540641 163 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 MRPS36P5-201ENST00000551909 298 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC090115.3-201ENST00000553218 849 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.82□□□□□ -2.28
AP1S3Q96PC3 WISP1-OT1-201ENST00000602893 642 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 BBIP1P1-201ENST00000602999 279 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC021171.1-201ENST00000603137 706 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC098826.3-201ENST00000603823 466 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC034229.4-201ENST00000607861 441 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC097468.3-201ENST00000607956 456 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AL512598.1-201ENST00000610158 273 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 TUG1_2.1-201ENST00000614234 87 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC253576.2-201ENST00000618815 580 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC019226.1-201ENST00000625666 515 ntBASIC0.82□□□□□ -2.28
AP1S3Q96PC3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 MIR513A1-201ENST00000385138 129 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 RNU6-1300P-201ENST00000391046 108 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 OR6C66P-201ENST00000414917 930 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC008267.5-201ENST00000424928 265 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 FABP5P15-201ENST00000453566 214 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 ACA59.2-201ENST00000517061 156 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 RNA5SP404-201ENST00000517118 132 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 RNU6-1261P-201ENST00000517194 104 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 RNU6-586P-201ENST00000517265 104 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AP000873.5-201ENST00000533906 236 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 RAB11AP2-201ENST00000545905 639 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 DNAJC19P9-201ENST00000555084 351 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 RPL30P11-203ENST00000598995 310 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 DPPA3P3-201ENST00000603842 430 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC087045.1-201ENST00000605856 382 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC013412.1-201ENST00000610687 192 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AL078604.3-201ENST00000615580 211 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC097655.1-201ENST00000635075 318 ntBASIC0.81□□□□□ -2.28
AP1S3Q96PC3 AC092125.1-201ENST00000562568 1995 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms