Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU6-166P-201ENST00000384371 107 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 MIR518D-201ENST00000385014 87 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 BTF3P7-201ENST00000407097 488 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 ELOCP4-201ENST00000420090 333 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 BX276092.3-201ENST00000424182 230 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC007283.2-201ENST00000424739 197 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC007560.1-201ENST00000426912 237 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 MED13P1-201ENST00000428342 171 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AL356320.1-201ENST00000429616 163 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 RPS24P1-201ENST00000438550 371 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 PGBD4P3-201ENST00000440731 581 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 RPL32P28-201ENST00000443577 397 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC011753.1-201ENST00000451001 220 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 ART2BP-201ENST00000453501 499 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC023194.1-201ENST00000493084 308 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 MIR5571-201ENST00000577998 113 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AL022154.1-201ENST00000604698 785 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC091304.9-201ENST00000612091 226 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 HMGB1P24-202ENST00000615653 685 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC108479.2-201ENST00000617314 601 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AL603755.1-201ENST00000619504 163 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 AC091304.6-201ENST00000619761 202 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF560Q96MR9 PISRT1-201ENST00000626175 531 ntBASIC2.48□□□□□ -2.01
ZNF560Q96MR9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 RNU6-486P-201ENST00000363116 107 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 RNU1-91P-201ENST00000364746 163 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 RNU6-39P-201ENST00000384344 107 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 MIR558-201ENST00000384920 94 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 MIR218-1-201ENST00000384999 110 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 Z98742.2-201ENST00000431564 187 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 RPS15AP28-201ENST00000435088 386 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 BTF3P15-201ENST00000455606 336 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 RPS27P27-201ENST00000498779 255 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 RNA5SP112-201ENST00000515937 99 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 ACA59.2-201ENST00000517061 156 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 MTCYBP20-201ENST00000524239 1129 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AL645944.1-201ENST00000603857 493 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AC069294.1-201ENST00000608397 350 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AC063944.3-201ENST00000609969 533 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AC013412.1-201ENST00000610687 192 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZNF560Q96MR9 AC103710.2-202ENST00000641454 2853 ntBASIC2.47□□□□□ -2.01
ZNF560Q96MR9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 RNU6-898P-201ENST00000365627 104 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 RPS3AP36-201ENST00000398190 775 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 RNU2-39P-201ENST00000410604 198 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 RPL30P4-201ENST00000429309 333 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 MTND6P13-201ENST00000443510 523 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 FABP5P13-201ENST00000452144 328 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AP001324.2-201ENST00000461163 319 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 RPL22P13-201ENST00000493291 347 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 HMGB3P3-201ENST00000510526 400 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AC008549.1-201ENST00000512900 643 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 MIR3915-201ENST00000578518 97 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 BNIP3P8-201ENST00000597863 560 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AC024581.2-201ENST00000619986 252 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 MIR6766-201ENST00000622641 72 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 AC244517.12-201ENST00000623581 663 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 MIR203B-201ENST00000636080 86 ntBASIC2.46□□□□□ -2.02
ZNF560Q96MR9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms