Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.74□□□□□ -1.65
IFT43Q96FT9 RPL23AP75-201ENST00000491601 451 ntBASIC4.74□□□□□ -1.65
IFT43Q96FT9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.74□□□□□ -1.65
IFT43Q96FT9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.74□□□□□ -1.65
IFT43Q96FT9 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.74□□□□□ -1.65
IFT43Q96FT9 SCARNA4-201ENST00000629045 128 ntBASIC4.74□□□□□ -1.65
IFT43Q96FT9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
IFT43Q96FT9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
IFT43Q96FT9 SCN1A-220ENST00000641603 12506 ntBASIC4.74□□□□□ -1.65
IFT43Q96FT9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.74□□□□□ -1.65
IFT43Q96FT9 MAPK10-253ENST00000641010 4072 ntBASIC4.74□□□□□ -1.65
IFT43Q96FT9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
IFT43Q96FT9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
IFT43Q96FT9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
IFT43Q96FT9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
IFT43Q96FT9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
IFT43Q96FT9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
IFT43Q96FT9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
IFT43Q96FT9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
IFT43Q96FT9 RNU6-968P-201ENST00000384076 107 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RNU6-17P-201ENST00000384245 107 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RNU6-102P-201ENST00000384485 104 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RNU6-18P-201ENST00000384527 107 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RNU6-493P-201ENST00000391321 108 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RNA5SP397-201ENST00000391323 118 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 U3.37-201ENST00000408528 213 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 Y_RNA.626-201ENST00000411288 95 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RAB9AP3-201ENST00000412737 573 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 TMSB10P2-201ENST00000416049 131 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 AC092017.2-201ENST00000427600 362 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 Z82210.1-201ENST00000440037 231 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 AC016700.2-201ENST00000446011 156 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RAB9AP1-201ENST00000449393 573 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 NUTF2P7-201ENST00000453086 375 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 HSPE1P25-201ENST00000455484 251 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 AC006026.2-201ENST00000457376 180 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 RNU6-1278P-201ENST00000516130 107 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RNU6-861P-201ENST00000516745 106 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 AC024153.1-201ENST00000603103 365 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 AC072026.1-201ENST00000605023 201 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RMST_6.1-201ENST00000611980 203 ntBASIC4.73□□□□□ -1.65
IFT43Q96FT9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
IFT43Q96FT9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
IFT43Q96FT9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.72□□□□□ -1.65
IFT43Q96FT9 AC007390.2-201ENST00000606229 3803 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
IFT43Q96FT9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
IFT43Q96FT9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.72□□□□□ -1.65
IFT43Q96FT9 AC006971.1-201ENST00000407916 4486 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
IFT43Q96FT9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
IFT43Q96FT9 AL590240.1-201ENST00000334118 313 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 RNU6-222P-201ENST00000362438 107 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 SNORA71.2-201ENST00000364941 134 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 RNU6-326P-201ENST00000365480 107 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 MIR93-201ENST00000385024 80 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 AC140479.3-201ENST00000418944 1126 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 RPL18P10-201ENST00000425606 538 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.72□□□□□ -1.65
IFT43Q96FT9 AL353705.4-201ENST00000449661 238 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 RN7SL385P-201ENST00000468873 276 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 RPL31P13-201ENST00000484151 370 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 MRPL42P6-201ENST00000486397 371 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
IFT43Q96FT9 SNORA43.2-201ENST00000516652 128 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
IFT43Q96FT9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.72□□□□□ -1.65
IFT43Q96FT9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.72□□□□□ -1.65
IFT43Q96FT9 MTND6P33-201ENST00000571794 183 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.72□□□□□ -1.65
IFT43Q96FT9 RPL23AP88-201ENST00000605759 454 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 AC241585.2-209ENST00000638217 143 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.72□□□□□ -1.65
IFT43Q96FT9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
IFT43Q96FT9 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
IFT43Q96FT9 MAPK10-286ENST00000641208 8747 ntBASIC4.71□□□□□ -1.65
IFT43Q96FT9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.65
IFT43Q96FT9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
IFT43Q96FT9 RNA5SP513-201ENST00000364648 118 ntBASIC4.71□□□□□ -1.66
IFT43Q96FT9 RNY4P28-201ENST00000365281 93 ntBASIC4.71□□□□□ -1.66
IFT43Q96FT9 U3.15-201ENST00000365398 212 ntBASIC4.71□□□□□ -1.66
IFT43Q96FT9 MIR129-1-201ENST00000384972 72 ntBASIC4.71□□□□□ -1.66
IFT43Q96FT9 CYCSP32-201ENST00000440548 321 ntBASIC4.71□□□□□ -1.66
IFT43Q96FT9 RPL23AP49-201ENST00000492925 468 ntBASIC4.71□□□□□ -1.66
IFT43Q96FT9 RNU6-703P-201ENST00000516946 107 ntBASIC4.71□□□□□ -1.66
IFT43Q96FT9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms