Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RNU6-1287P-201ENST00000362914 107 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RNA5SP374-201ENST00000362939 125 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RNU6-1060P-201ENST00000384664 107 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RNU6-606P-201ENST00000384721 111 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RNU6-443P-201ENST00000384780 107 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 MIR592-201ENST00000384959 97 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AL139039.1-201ENST00000401900 692 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 YME1L1P1-201ENST00000429435 297 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC132479.1-201ENST00000449160 144 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 PRSS3P4-201ENST00000453323 162 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 FTH1P2-201ENST00000466086 412 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 MED28P2-201ENST00000475771 317 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC090525.1-201ENST00000479116 478 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RPL36AP48-201ENST00000485521 314 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC090096.1-201ENST00000489168 390 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC010424.1-201ENST00000506336 297 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC002456.2-201ENST00000509356 380 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC074250.1-201ENST00000511117 192 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 SNORA31.15-201ENST00000516771 132 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RNA5SP503-201ENST00000517047 117 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC079598.5-201ENST00000547460 117 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 MIR5571-201ENST00000577998 113 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 ZNF861P-201ENST00000588126 639 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC008739.3-201ENST00000603262 127 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 Z84480.1-201ENST00000605131 311 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 YPEL5P2-201ENST00000605553 359 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 AC011890.2-201ENST00000613393 294 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 RMST_4.1-201ENST00000616886 107 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 MIR3529-201ENST00000637713 78 ntBASIC2.67□□□□□ -1.98
VPS33AQ96AX1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS33AQ96AX1 Z75746.1-201ENST00000440243 2080 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 MIR26A1-201ENST00000362205 77 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 RNU6-550P-201ENST00000391057 101 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 RPL21P90-201ENST00000415692 466 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC097463.2-201ENST00000421074 142 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 MTCO3P30-201ENST00000426425 670 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AL596276.1-201ENST00000434465 418 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 MTCO1P19-201ENST00000443487 500 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC006026.2-201ENST00000457376 180 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 GMFBP1-201ENST00000467831 427 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 RPL7P43-201ENST00000478876 753 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC011005.2-201ENST00000487324 359 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 TBCAP3-201ENST00000512475 312 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC117532.1-201ENST00000514638 323 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC025678.1-201ENST00000567861 338 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC010620.1-201ENST00000601088 1102 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AL356575.1-201ENST00000603008 283 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 RPL12P50-201ENST00000603116 116 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AC096772.1-201ENST00000609146 564 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AL162274.2-201ENST00000614406 332 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 MIR3651-201ENST00000630427 90 ntBASIC2.66□□□□□ -1.98
VPS33AQ96AX1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VPS33AQ96AX1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.65□□□□□ -1.98
VPS33AQ96AX1 OR4G2P-201ENST00000328113 903 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 RNU6-942P-201ENST00000363002 107 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 RNA5SP72-201ENST00000364442 117 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 RNU6-384P-201ENST00000364900 104 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 RNU6-487P-201ENST00000365430 104 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 RNU6-116P-201ENST00000384042 109 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 SNORA48.5-201ENST00000391143 135 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 RNU4-46P-201ENST00000410818 138 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 MTCO2P34-201ENST00000421994 607 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 RPS3AP44-201ENST00000425466 790 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 MTCO2P11-201ENST00000431069 680 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 MTCO2P16-201ENST00000436962 677 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 MTND4P32-201ENST00000437189 1237 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC096576.1-201ENST00000489014 359 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms