Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 AC002400.1-201ENST00000569310 726 ntBASIC0.72□□□□□ -2.29
SPTSSAQ969W0 AC002545.1-201ENST00000592511 181 ntBASIC0.72□□□□□ -2.29
SPTSSAQ969W0 VN1R107P-201ENST00000601784 209 ntBASIC0.72□□□□□ -2.29
SPTSSAQ969W0 AC016727.1-205ENST00000605437 569 ntBASIC0.72□□□□□ -2.29
SPTSSAQ969W0 AL133216.2-202ENST00000634512 349 ntBASIC0.72□□□□□ -2.29
SPTSSAQ969W0 MIR4275-201ENST00000636486 87 ntBASIC0.72□□□□□ -2.29
SPTSSAQ969W0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 RNA5SP327-201ENST00000362494 101 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 RNU6-1164P-201ENST00000364428 107 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 MTCYBP38-201ENST00000417160 1123 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 NANOGP2-201ENST00000435391 727 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AC002381.1-201ENST00000447049 280 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AL160314.1-201ENST00000490836 438 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AP005136.1-201ENST00000579765 429 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 AC079416.3-201ENST00000624479 549 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
SPTSSAQ969W0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.71□□□□□ -2.3
SPTSSAQ969W0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 RNU1-58P-201ENST00000362413 163 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 SNORA18.2-201ENST00000383865 132 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 RNU6-657P-201ENST00000383904 107 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 SNORA48.1-201ENST00000390879 135 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 UBE2V1P11-201ENST00000411559 285 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AL451054.2-201ENST00000420896 202 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AL603825.1-201ENST00000438481 80 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 MEMO1P3-201ENST00000459811 302 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AC112771.1-201ENST00000463581 102 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 RNA5SP404-201ENST00000517118 132 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 SNORA77B-201ENST00000578179 125 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 CYP2C61P-201ENST00000604072 290 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AL118556.2-201ENST00000614375 824 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AC004009.2-201ENST00000623016 728 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AC017037.3-201ENST00000625016 472 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 AC233981.2-201ENST00000611524 1614 ntBASIC0.7□□□□□ -2.3
SPTSSAQ969W0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
SPTSSAQ969W0 ICE2P2-201ENST00000483823 2787 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
SPTSSAQ969W0 OR5T3-201ENST00000303059 1023 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 MIR302D-201ENST00000362275 68 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 MIR337-201ENST00000362281 93 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 SNORA27.3-201ENST00000364937 134 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 RNU1-39P-201ENST00000383897 165 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 RNU6-1032P-201ENST00000384100 107 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 SNORD14D-201ENST00000384390 87 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 ELOCP14-201ENST00000428070 331 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.69□□□□□ -2.3
SPTSSAQ969W0 MTND2P5-201ENST00000432656 1006 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 ELOCP7-201ENST00000439968 331 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 CALM1P1-201ENST00000442082 433 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AC245102.2-201ENST00000448956 180 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AC011005.2-201ENST00000487324 359 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AC048346.1-201ENST00000510247 144 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 RNA5SP290-201ENST00000517133 127 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 CENPUP1-201ENST00000526649 1202 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AP000907.2-201ENST00000530827 353 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 PSMA3P-201ENST00000555485 635 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AC093519.1-201ENST00000566109 298 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 ADAM3B-201ENST00000569937 840 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 RN7SL622P-201ENST00000585292 275 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 NIFKP6-201ENST00000598115 845 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 BNIP3P10-201ENST00000605360 577 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AL355802.3-201ENST00000607571 545 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AL078604.3-201ENST00000615580 211 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AL138713.1-201ENST00000624026 2130 ntBASIC0.69□□□□□ -2.3
SPTSSAQ969W0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
SPTSSAQ969W0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.68□□□□□ -2.3
SPTSSAQ969W0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SPTSSAQ969W0 RNU6-582P-201ENST00000362989 107 ntBASIC0.68□□□□□ -2.3
SPTSSAQ969W0 RNU6-1005P-201ENST00000384519 107 ntBASIC0.68□□□□□ -2.3
SPTSSAQ969W0 RPL22P22-201ENST00000395439 379 ntBASIC0.68□□□□□ -2.3
SPTSSAQ969W0 RAC1P8-201ENST00000427086 527 ntBASIC0.68□□□□□ -2.3
SPTSSAQ969W0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.68□□□□□ -2.3
SPTSSAQ969W0 AC092170.1-201ENST00000440211 356 ntBASIC0.68□□□□□ -2.3
SPTSSAQ969W0 RAD1P2-201ENST00000446414 663 ntBASIC0.68□□□□□ -2.3
SPTSSAQ969W0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms