Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNU6-270P-201ENST00000364131 105 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 RNU6-266P-201ENST00000364225 107 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HPS3Q969F9 RNA5SP38-201ENST00000410750 119 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 MTND3P8-201ENST00000412909 339 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AL353729.1-201ENST00000425044 720 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AL365400.1-201ENST00000431854 640 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS3Q969F9 AL583843.1-201ENST00000456070 346 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC092798.1-201ENST00000458542 409 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 snoU13.28-201ENST00000459235 104 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC128713.1-201ENST00000471495 306 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC021205.2-201ENST00000480069 347 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC026801.1-201ENST00000497178 464 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC091951.2-201ENST00000500762 203 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 RNU6-875P-201ENST00000516488 106 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS3Q969F9 NACAP3-201ENST00000552100 481 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC005498.1-201ENST00000592125 465 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 CTHRC1P1-201ENST00000605383 469 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC002044.1-201ENST00000606707 158 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AL022345.1-201ENST00000607292 135 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AL357078.3-201ENST00000607528 618 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.71□□□□□ -1.82
HPS3Q969F9 RMST_4.1-201ENST00000616886 107 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HPS3Q969F9 MTND5P7-201ENST00000413558 1798 ntBASIC3.71□□□□□ -1.82
HPS3Q969F9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HPS3Q969F9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.7□□□□□ -1.82
HPS3Q969F9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AC007496.3-201ENST00000624987 3443 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 RNU6-1303P-201ENST00000364841 107 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 RNU1-73P-201ENST00000383971 164 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 SNORA75B-201ENST00000384053 137 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 RNU6-658P-201ENST00000384606 106 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 MIR183-201ENST00000384958 110 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 MIR34A-201ENST00000385130 110 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 AL356057.2-201ENST00000403318 432 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.7□□□□□ -1.82
HPS3Q969F9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AC093019.1-201ENST00000443135 252 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 CYCSP35-201ENST00000451978 304 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.7□□□□□ -1.82
HPS3Q969F9 RPL26P9-201ENST00000457466 433 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 RN7SL293P-201ENST00000481765 281 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 AC093663.1-201ENST00000497190 394 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 AC074250.1-201ENST00000511117 192 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.7□□□□□ -1.82
HPS3Q969F9 RNU6-703P-201ENST00000516946 107 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HPS3Q969F9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.7□□□□□ -1.82
HPS3Q969F9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HPS3Q969F9 AL121757.2-201ENST00000611223 313 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 Y_RNA.804-201ENST00000615262 101 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HPS3Q969F9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.7□□□□□ -1.82
HPS3Q969F9 AC099654.5-201ENST00000636479 350 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 U2.21-201ENST00000637295 81 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HPS3Q969F9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HPS3Q969F9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.7□□□□□ -1.82
HPS3Q969F9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.7□□□□□ -1.82
HPS3Q969F9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HPS3Q969F9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.69□□□□□ -1.82
HPS3Q969F9 SRP72P2-201ENST00000344851 1979 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 SNORD3E-201ENST00000362899 217 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 Y_RNA.324-201ENST00000365165 102 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU6-166P-201ENST00000384371 107 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU6-831P-201ENST00000384548 107 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.69□□□□□ -1.82
HPS3Q969F9 RPL5P18-201ENST00000406671 891 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU2-3P-201ENST00000410144 191 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU6-1148P-201ENST00000410992 104 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 HMGB1P9-201ENST00000429856 646 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU6-329P-201ENST00000459618 107 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 AC011005.2-201ENST00000487324 359 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.69□□□□□ -1.82
HPS3Q969F9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.69□□□□□ -1.82
HPS3Q969F9 FCF1P8-201ENST00000510322 597 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.69□□□□□ -1.82
HPS3Q969F9 SNORA31.1-201ENST00000515993 133 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU6-507P-201ENST00000516045 100 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 SNORA31.5-201ENST00000516190 133 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU6-1069P-201ENST00000516612 133 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
HPS3Q969F9 RNU7-30P-201ENST00000516835 62 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms