Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR589-201ENST00000385238 99 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 SNORA77-201ENST00000408716 125 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-CQ95604 AC009963.1-201ENST00000417265 157 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 FTH1P6-201ENST00000430768 320 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 Y_RNA.637-201ENST00000459424 114 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 RPL30P12-201ENST00000474666 353 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 SCARNA22-201ENST00000503991 125 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 RNU6-1282P-201ENST00000516735 96 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 DEFB117-201ENST00000602356 141 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 AC006380.1-201ENST00000603598 186 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 AC004825.2-201ENST00000616634 455 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 TUG1_4.1-201ENST00000619464 181 ntBASIC5.16□□□□□ -1.58
HLA-CQ95604 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-CQ95604 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
HLA-CQ95604 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-CQ95604 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-CQ95604 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-CQ95604 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
HLA-CQ95604 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-CQ95604 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.15□□□□□ -1.58
HLA-CQ95604 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
HLA-CQ95604 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-CQ95604 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-CQ95604 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HLA-CQ95604 RNU1-94P-201ENST00000362627 173 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 RN7SKP224-201ENST00000364140 325 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 RNU1-100P-201ENST00000365255 165 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 SNORA2.3-201ENST00000383920 135 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 RNU6-80P-201ENST00000384195 107 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 MIR544A-201ENST00000384855 91 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 HMGN2P30-201ENST00000423237 256 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 AC012306.1-201ENST00000423267 114 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 RPL7AP25-201ENST00000423357 805 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.15□□□□□ -1.59
HLA-CQ95604 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-CQ95604 AC125238.1-201ENST00000448842 249 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-CQ95604 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-CQ95604 RNU6-966P-201ENST00000516479 104 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 CYCSP29-201ENST00000533731 318 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-CQ95604 MIR3138-201ENST00000585238 82 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 RNA5SP439-201ENST00000617595 124 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.15□□□□□ -1.59
HLA-CQ95604 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-CQ95604 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-CQ95604 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-CQ95604 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-CQ95604 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
HLA-CQ95604 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-CQ95604 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-CQ95604 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-CQ95604 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-CQ95604 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-CQ95604 RNU4-11P-201ENST00000365287 132 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 RNU6-217P-201ENST00000384164 104 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 SNORA70.10-201ENST00000384515 134 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 RNU6-578P-201ENST00000390980 103 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 AL512633.1-201ENST00000399931 655 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 MIR320B2-201ENST00000408479 138 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-CQ95604 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-CQ95604 RPS12P10-201ENST00000427031 377 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 AC244670.1-201ENST00000436879 112 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 HMGB1P37-201ENST00000439613 609 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-CQ95604 SNORA31.9-201ENST00000516429 84 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-CQ95604 AP002001.1-203ENST00000534002 267 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-CQ95604 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-CQ95604 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-CQ95604 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-CQ95604 AC060780.2-201ENST00000589047 198 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-CQ95604 AC019206.1-201ENST00000621938 425 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 MIR3674-201ENST00000636576 68 ntBASIC5.14□□□□□ -1.59
HLA-CQ95604 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-CQ95604 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-CQ95604 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-CQ95604 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-CQ95604 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HLA-CQ95604 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-CQ95604 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-CQ95604 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-CQ95604 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-CQ95604 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-CQ95604 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
HLA-CQ95604 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-CQ95604 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.13□□□□□ -1.59
HLA-CQ95604 RNU1-62P-201ENST00000362599 164 ntBASIC5.13□□□□□ -1.59
HLA-CQ95604 RNU1-73P-201ENST00000383971 164 ntBASIC5.13□□□□□ -1.59
HLA-CQ95604 ELOCP21-201ENST00000412558 336 ntBASIC5.13□□□□□ -1.59
HLA-CQ95604 AC009237.10-201ENST00000414112 510 ntBASIC5.13□□□□□ -1.59
HLA-CQ95604 RPL12P18-201ENST00000437175 325 ntBASIC5.13□□□□□ -1.59
HLA-CQ95604 RPS29P9-201ENST00000440360 171 ntBASIC5.13□□□□□ -1.59
HLA-CQ95604 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-CQ95604 RPL30P5-201ENST00000494923 336 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms