Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL713922.2-201ENST00000619384 716 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 U1.39-201ENST00000621562 146 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AL359693.1-201ENST00000614959 2407 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 RNU6-1188P-201ENST00000363795 107 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 MIR554-201ENST00000384874 96 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 RNA5SP129-201ENST00000410276 118 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 RN7SKP202-201ENST00000410439 330 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AL590632.1-201ENST00000424289 371 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AC005741.1-201ENST00000511094 432 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 RNU1-86P-201ENST00000516108 154 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 MIR892C-201ENST00000516410 77 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 RNU1-107P-201ENST00000516617 154 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 RN7SKP289-201ENST00000517244 295 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 IGKV2-23-201ENST00000518729 323 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AP003072.1-201ENST00000531740 145 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AC026371.1-201ENST00000551867 419 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AC006557.5-201ENST00000603126 811 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.812-201ENST00000610788 101 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.784-201ENST00000613803 101 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.787-201ENST00000616522 101 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.780-201ENST00000617336 101 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.801-201ENST00000619005 101 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AC098657.3-201ENST00000620434 263 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
ATG4AQ8WYN0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC138393.1-203ENST00000327086 343 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 MIR412-201ENST00000362142 91 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 SNORD3E-201ENST00000362899 217 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.326-201ENST00000365176 113 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 SNORD42.2-201ENST00000365570 69 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 DEFB109C-201ENST00000382575 264 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 DEFB109B-201ENST00000382656 264 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RNU6-95P-201ENST00000384697 107 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 SNORA48.7-201ENST00000391302 135 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RNU6-1304P-201ENST00000411374 106 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RAB9AP3-201ENST00000412737 573 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RPS15AP6-201ENST00000420703 385 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AL353729.1-201ENST00000425044 720 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 HMGB1P9-201ENST00000429856 646 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RAB9AP1-201ENST00000449393 573 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 CECR9-201ENST00000453421 199 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RBMY2UP-201ENST00000453474 324 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.639-201ENST00000458981 102 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RPL21P104-201ENST00000464143 478 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC011005.2-201ENST00000487324 359 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RNU6-1016P-201ENST00000516689 94 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RNU1-45P-201ENST00000517191 141 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 IGKV2D-19-201ENST00000523346 262 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC034105.4-201ENST00000568304 277 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 NUTF2P8-201ENST00000604593 363 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC080078.3-201ENST00000605407 463 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RNU6-85P-201ENST00000605989 107 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 MIR7851-201ENST00000610611 160 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC134503.1-201ENST00000633048 54 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AC009093.8-201ENST00000641769 292 ntBASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4AQ8WYN0 AL356274.2-201ENST00000624379 3752 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 RNA5SP119-201ENST00000362715 117 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.324-201ENST00000365165 102 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AL590004.1-201ENST00000405321 300 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 U3.42-201ENST00000408746 214 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms