Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MIR3167-201ENST00000579623 85 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.02□□□□□ -1.93
SNED1Q8TER0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.02□□□□□ -1.93
SNED1Q8TER0 AC243960.4-201ENST00000600532 288 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 AC121334.2-201ENST00000605387 271 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 AL050343.2-201ENST00000607338 280 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 Y_RNA.812-201ENST00000610788 101 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 AC006329.2-201ENST00000611491 394 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 Y_RNA.784-201ENST00000613803 101 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 AL110115.1-201ENST00000614396 364 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 Y_RNA.787-201ENST00000616522 101 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 Y_RNA.780-201ENST00000617336 101 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 Y_RNA.801-201ENST00000619005 101 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 AL360181.4-201ENST00000621752 134 ntBASIC3.02□□□□□ -1.93
SNED1Q8TER0 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.02□□□□□ -1.93
SNED1Q8TER0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SNED1Q8TER0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNED1Q8TER0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNED1Q8TER0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNED1Q8TER0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNED1Q8TER0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNED1Q8TER0 Y_RNA.58-201ENST00000362807 102 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 RNU6-223P-201ENST00000362830 107 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 RNU6-451P-201ENST00000362921 107 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 Y_RNA.154-201ENST00000363624 102 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 RNY3P1-201ENST00000365085 102 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 RNY3-201ENST00000365484 102 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 SNORA69-201ENST00000383895 132 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 Y_RNA.490-201ENST00000384413 102 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 RNU6-332P-201ENST00000391193 108 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC068050.1-201ENST00000394891 380 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 RNU6-373P-201ENST00000411247 98 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 MTCO2P5-201ENST00000422621 426 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AL353777.1-201ENST00000425552 326 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 AL606489.2-201ENST00000433886 234 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC096638.1-201ENST00000444678 216 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC083798.1-201ENST00000472671 131 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC104563.1-201ENST00000476147 376 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC034222.1-201ENST00000494052 532 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNED1Q8TER0 MLLT10P2-201ENST00000506434 249 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 SNORA31.8-201ENST00000516327 108 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC093027.1-201ENST00000546698 429 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC123904.2-201ENST00000548059 300 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 AL121821.2-201ENST00000556081 394 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 Z84480.1-201ENST00000605131 311 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 BX664608.1-201ENST00000610519 487 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AL132765.2-201ENST00000610812 351 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 DISC2.1-201ENST00000612827 205 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC024940.5-201ENST00000622889 474 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 AC009161.2-201ENST00000624626 138 ntBASIC3.01□□□□□ -1.93
SNED1Q8TER0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.01□□□□□ -1.93
SNED1Q8TER0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNED1Q8TER0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNED1Q8TER0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNED1Q8TER0 AC092125.1-201ENST00000562568 1995 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNED1Q8TER0 RNU5E-1-201ENST00000362477 120 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 RNU6-1120P-201ENST00000362988 108 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 RNY1P12-201ENST00000364251 105 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 RNU6-853P-201ENST00000364306 107 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 RNU6-744P-201ENST00000365557 107 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
SNED1Q8TER0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SNED1Q8TER0 RNU1-39P-201ENST00000383897 165 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 SNORA20.2-201ENST00000383922 131 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 RNU6-76P-201ENST00000384060 104 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 SNORA51.6-201ENST00000384151 125 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 RNU6-1316P-201ENST00000384242 108 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 5S_rRNA.2-201ENST00000391293 112 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 AL356432.1-201ENST00000405809 419 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 RNU6-1068P-201ENST00000410958 103 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 AC078974.1-201ENST00000411597 223 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3□□□□□ -1.93
SNED1Q8TER0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3□□□□□ -1.93
SNED1Q8TER0 BTF3L4P3-201ENST00000418879 476 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 PDCL2P1-201ENST00000419302 352 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 AL365400.1-201ENST00000431854 640 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3□□□□□ -1.93
SNED1Q8TER0 TAAR7P-201ENST00000436141 242 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3□□□□□ -1.93
SNED1Q8TER0 HSPE1P28-201ENST00000443139 211 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 CBWD4P-201ENST00000445695 655 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 snoU109.4-201ENST00000458953 143 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 MTND5P5-201ENST00000503764 376 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3□□□□□ -1.93
SNED1Q8TER0 AC010587.1-201ENST00000505809 469 ntBASIC3□□□□□ -1.93
SNED1Q8TER0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms