Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RPL30P5-201ENST00000494923 336 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 RNU6-475P-201ENST00000516073 104 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 RN7SKP289-201ENST00000517244 295 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 CASP1P1-201ENST00000526345 212 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AC103996.1-201ENST00000555468 102 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AL158827.2-201ENST00000602494 330 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AC018889.1-201ENST00000605372 397 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 MIR7703-201ENST00000620784 77 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AL606534.2-204ENST00000635008 178 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AL691447.3-201ENST00000635020 330 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HIPK4Q8NE63 AC091812.1-201ENST00000432235 1948 ntBASIC3.81□□□□□ -1.8
HIPK4Q8NE63 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 RNU6-99P-201ENST00000364721 107 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 RNU6-140P-201ENST00000384566 108 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AL591034.2-201ENST00000402839 359 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AL138885.1-201ENST00000405921 675 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 SNORA11B-201ENST00000408175 129 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AL358472.1-201ENST00000431295 329 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 CHEK2P4-201ENST00000450340 246 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AL353752.1-201ENST00000454946 260 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AC112492.4-201ENST00000456549 352 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AC093840.1-201ENST00000511599 336 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AC099522.1-202ENST00000514718 367 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 RNU6-703P-201ENST00000516946 107 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 IGKV2-23-201ENST00000518729 323 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AP000889.1-201ENST00000530968 660 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 ZNF192P1-203ENST00000565888 810 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 MIR4273-201ENST00000582824 84 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 MIR5684-201ENST00000585074 65 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AC244505.7-201ENST00000599675 272 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AL121655.1-201ENST00000605811 308 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 TNPO1P3-201ENST00000436471 2662 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.8□□□□□ -1.8
HIPK4Q8NE63 AC118273.1-201ENST00000525324 3006 ntBASIC3.8□□□□□ -1.8
HIPK4Q8NE63 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 FTLP6-201ENST00000355274 422 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 SNORA60-201ENST00000362396 134 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 RNY1P16-201ENST00000363063 111 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 RNU1-132P-201ENST00000364300 164 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 RNU6-26P-201ENST00000383985 107 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 Y_RNA.577-201ENST00000384794 101 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 MIR34A-201ENST00000385130 110 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 RNU2-71P-201ENST00000411395 189 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 NUP35P1-201ENST00000422734 947 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 TOMM20P4-201ENST00000427861 435 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC096644.2-201ENST00000429278 159 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 U8.20-201ENST00000459445 131 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC133134.1-201ENST00000466800 359 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 RN7SL459P-201ENST00000481078 302 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 Y_RNA.687-201ENST00000516558 91 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 RNA5SP468-201ENST00000516782 93 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC109479.2-201ENST00000517842 174 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC025627.2-201ENST00000576220 160 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 MIR4700-201ENST00000578311 74 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 AC006023.2-201ENST00000609916 167 ntBASIC3.79□□□□□ -1.8
HIPK4Q8NE63 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.79□□□□□ -1.8
HIPK4Q8NE63 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIPK4Q8NE63 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.78□□□□□ -1.8
HIPK4Q8NE63 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
HIPK4Q8NE63 Y_RNA.39-201ENST00000362620 98 ntBASIC3.78□□□□□ -1.8
HIPK4Q8NE63 Y_RNA.47-201ENST00000362697 108 ntBASIC3.78□□□□□ -1.8
HIPK4Q8NE63 RNU6-428P-201ENST00000362942 107 ntBASIC3.78□□□□□ -1.8
HIPK4Q8NE63 Y_RNA.314-201ENST00000365114 102 ntBASIC3.78□□□□□ -1.8
HIPK4Q8NE63 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.78□□□□□ -1.8
HIPK4Q8NE63 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms