Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-142P-201ENST00000384019 107 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 RNU6-622P-201ENST00000384272 103 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 RNU6-1222P-201ENST00000384615 107 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 MIR544A-201ENST00000384855 91 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 RNA5SP339-201ENST00000390987 122 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC092642.1-201ENST00000392417 425 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 MTCYBP2-201ENST00000407745 171 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 RNU4-6P-201ENST00000410804 122 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 RPL26P29-201ENST00000415623 438 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC007098.1-201ENST00000420122 367 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 CHEK2P5-201ENST00000423877 246 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 MTCYBP10-201ENST00000424905 650 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 RPL23AP95-201ENST00000426806 265 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AP001025.1-201ENST00000486139 332 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 RPL30P10-201ENST00000488148 337 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AL355802.3-201ENST00000607571 545 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC096772.1-201ENST00000609146 564 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC006157.1-201ENST00000611750 366 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC090510.2-201ENST00000617465 629 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC091925.1-201ENST00000623204 462 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 AC002543.1-201ENST00000299783 1954 ntBASIC3.49□□□□□ -1.85
CLRN3Q8NCR9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 RNU1-132P-201ENST00000364300 164 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 RNU6-1032P-201ENST00000384100 107 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 RNU6-1160P-201ENST00000384546 104 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 MIR606-201ENST00000384851 96 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 MIR625-201ENST00000385047 85 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 RNU1-77P-201ENST00000390868 162 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 RNU1-101P-201ENST00000391171 127 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AL138885.1-201ENST00000405921 675 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 MIR1286-201ENST00000408112 78 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 SNORA74C-2-201ENST00000411179 201 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 GZMAP1-201ENST00000503054 631 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 ATP5LP3-201ENST00000514223 304 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 RNU6-120P-201ENST00000516077 103 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AL590705.4-201ENST00000532209 134 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AC004584.2-201ENST00000570407 410 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AC010653.1-201ENST00000571108 881 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AL160290.3-201ENST00000604869 165 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 Z98200.1-201ENST00000607298 470 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AL138825.1-201ENST00000618587 192 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AC007792.1-201ENST00000623023 402 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 AC233981.2-201ENST00000611524 1614 ntBASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CLRN3Q8NCR9 CPHL1P-201ENST00000461341 3407 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 Y_RNA.148-201ENST00000363557 117 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 RNU6-799P-201ENST00000363567 107 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 RNU6-99P-201ENST00000364721 107 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 SNORD32A-201ENST00000364805 84 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 RNU6-968P-201ENST00000384076 107 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 RSL24D1P6-201ENST00000426934 401 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AL031659.1-201ENST00000447075 539 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AC016632.1-201ENST00000503994 196 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AC091868.1-201ENST00000508746 304 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 RNA5SP362-201ENST00000516048 118 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 RNU6-1045P-201ENST00000516321 107 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AC126177.5-201ENST00000549599 178 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AC105137.2-201ENST00000569073 466 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 MIR5701-3-201ENST00000578890 82 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 MIR5701-1-201ENST00000585138 82 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 RNVU1-4-201ENST00000612985 164 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 MIR5701-2-201ENST00000615634 82 ntBASIC3.47□□□□□ -1.85
CLRN3Q8NCR9 AC119674.1-207ENST00000641355 633 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms