Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 MIR7112-201ENST00000616126 65 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 Z83843.1-201ENST00000604070 3685 ntBASIC3.96□□□□□ -1.78
PRPF38AQ8NAV1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 CEP170P1-201ENST00000502249 4587 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 RNU6-799P-201ENST00000363567 107 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 Y_RNA.160-201ENST00000363677 92 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 SNORD14B-201ENST00000364533 90 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 USP9YP20-201ENST00000419224 558 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 RPS15AP6-201ENST00000420703 385 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AC098831.1-201ENST00000440661 216 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AC010486.1-201ENST00000511793 424 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 RPL7P20-201ENST00000520308 745 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AP006245.1-201ENST00000522549 120 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AC011712.1-201ENST00000588959 234 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AL160281.1-201ENST00000605307 311 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AC087045.1-201ENST00000605856 382 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AC093536.2-201ENST00000565257 1406 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 AC068647.1-201ENST00000489539 2265 ntBASIC3.95□□□□□ -1.78
PRPF38AQ8NAV1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 MIR10A-201ENST00000385043 110 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 RNU6-510P-201ENST00000391239 108 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AC138393.2-201ENST00000414742 246 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 RPL21P111-201ENST00000418453 477 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AL365496.1-201ENST00000426885 215 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AL353572.1-201ENST00000442490 417 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 BTF3P15-201ENST00000455606 336 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 SNORA19.2-201ENST00000516013 114 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 RNU6-1314P-201ENST00000517139 104 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AC022634.1-201ENST00000520765 532 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AP000763.2-201ENST00000540641 163 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 DNAJC8P1-201ENST00000554535 372 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 PSMA3P-201ENST00000555485 635 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 MIR4276-201ENST00000584832 70 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 MIR8057-201ENST00000620957 69 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AC032011.1-201ENST00000611703 1549 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 AC073073.2-201ENST00000609827 2578 ntBASIC3.94□□□□□ -1.78
PRPF38AQ8NAV1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 SNORD113-7-201ENST00000363762 77 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 RNU6-266P-201ENST00000364225 107 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 Y_RNA.324-201ENST00000365165 102 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 RNU2-3P-201ENST00000410144 191 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AL592148.1-201ENST00000413568 445 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AL645937.1-202ENST00000421799 937 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 RPS15AP5-201ENST00000436276 388 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 NDUFA5P4-201ENST00000436704 385 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 RNU1-86P-201ENST00000516108 154 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 RNU1-107P-201ENST00000516617 154 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AC023050.3-201ENST00000541142 333 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 ATP1B3P1-201ENST00000605365 821 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AC090617.10-201ENST00000624308 134 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AL008636.1-201ENST00000625038 1018 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 MIR3199-2-201ENST00000636243 86 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 MIR7153-201ENST00000637758 57 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 AC091564.4-201ENST00000533934 2194 ntBASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF38AQ8NAV1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF38AQ8NAV1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF38AQ8NAV1 RNU1-105P-201ENST00000363470 161 ntBASIC3.92□□□□□ -1.78
PRPF38AQ8NAV1 RNU6-283P-201ENST00000364788 107 ntBASIC3.92□□□□□ -1.78
PRPF38AQ8NAV1 Z98749.2-208ENST00000381646 500 ntBASIC3.92□□□□□ -1.78
PRPF38AQ8NAV1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms