Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MIR1-2-201ENST00000384961 85 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AL663109.1-201ENST00000411498 844 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 MORF4L1P6-201ENST00000418771 268 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 DLGAP5P1-201ENST00000430307 464 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC087499.2-201ENST00000432861 149 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC098831.1-201ENST00000440661 216 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 IFNA11P-201ENST00000446352 526 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 HMGN2P10-201ENST00000448085 265 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC107626.1-201ENST00000471084 183 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 TRBV1-201ENST00000476502 284 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AL358832.1-201ENST00000497800 389 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC116562.3-201ENST00000506136 177 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 SNORA31.6-201ENST00000516241 130 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-703P-201ENST00000516946 107 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-1183P-201ENST00000517054 60 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 RNA5SP402-201ENST00000517148 110 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC009902.1-201ENST00000519351 183 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 CKS1BP7-201ENST00000522230 235 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 MTCYBP20-201ENST00000524239 1129 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC068587.5-201ENST00000528506 175 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 ADI1P3-201ENST00000549509 470 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 NACAP3-201ENST00000552100 481 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC087683.1-201ENST00000591187 441 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC174048.1-201ENST00000603389 144 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC091805.2-201ENST00000603848 235 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC007179.3-201ENST00000604976 235 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 MIR15A-201ENST00000607334 83 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AL449363.1-201ENST00000617815 186 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-179P-201ENST00000363350 107 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 Y_RNA.194-201ENST00000363985 102 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RNU4-24P-201ENST00000364565 139 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RNU4-75P-201ENST00000364621 146 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 Y_RNA.296-201ENST00000364930 108 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RNU1-140P-201ENST00000365040 165 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-1042P-201ENST00000384204 107 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 SNORA80E-201ENST00000384744 137 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 MIR483-201ENST00000385070 76 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 OR51A5P-201ENST00000415429 942 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC007560.1-201ENST00000426912 237 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 HMGB1P9-201ENST00000429856 646 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AL161651.1-201ENST00000440882 223 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC079781.2-201ENST00000446424 169 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC092001.1-201ENST00000453012 261 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC128713.1-201ENST00000471495 306 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RPS3AP17-201ENST00000472594 777 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC126389.1-201ENST00000477436 290 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC023194.1-201ENST00000493084 308 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RBBP4P6-201ENST00000508098 202 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 MTCO3P7-201ENST00000510008 774 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC074250.1-201ENST00000511117 192 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 MTND3P5-201ENST00000512798 333 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-405P-201ENST00000516637 110 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-572P-201ENST00000516724 80 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 OR5AL2P-201ENST00000532185 920 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC006199.1-201ENST00000548728 219 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 SUB1P2-201ENST00000556401 297 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 MTCYBP33-201ENST00000575007 1130 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC103987.3-201ENST00000582071 292 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AL355598.1-201ENST00000604169 202 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC096577.2-201ENST00000611455 153 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC025034.2-201ENST00000623264 286 ntBASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AC093648.1-201ENST00000623546 606 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms