Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 BTF3P15-201ENST00000455606 336 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC011005.2-201ENST00000487324 359 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 MTCYBP43-201ENST00000513621 740 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 SNORA48.11-201ENST00000517015 89 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 MIR4255-201ENST00000579351 72 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC090897.2-201ENST00000581715 130 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AL031274.2-201ENST00000599419 203 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC005034.5-201ENST00000604219 466 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 RNU6-91P-201ENST00000607774 107 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC009974.1-201ENST00000608881 455 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AP000776.1-201ENST00000530032 1663 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 RNU1-72P-201ENST00000362976 153 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 RNU6-288P-201ENST00000363690 104 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 SNORD116.1-201ENST00000365628 92 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 RNU6-701P-201ENST00000384059 107 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 MIR504-201ENST00000385065 83 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 MIR95-201ENST00000385072 81 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 MIR301A-201ENST00000385261 86 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 MIR676-201ENST00000390702 67 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 SNORA40.19-201ENST00000390846 128 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL627390.1-201ENST00000396055 340 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 HMGN2P39-201ENST00000398005 273 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC119751.3-201ENST00000399720 670 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC127391.1-201ENST00000411737 98 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL117351.1-201ENST00000438864 766 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 RPL7P18-201ENST00000478965 734 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 HMGB3P17-201ENST00000504195 649 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC117522.2-201ENST00000510049 657 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 MRPS17P9-201ENST00000511924 393 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 SNORA4.4-201ENST00000515921 135 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 RNU5B-3P-201ENST00000516601 115 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 RNU6-572P-201ENST00000516724 80 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC107953.1-201ENST00000522216 297 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC068587.4-201ENST00000533893 186 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL109918.3-201ENST00000603072 338 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL096840.1-201ENST00000603287 93 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL670379.10-201ENST00000604330 253 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 BNIP3P31-201ENST00000604515 566 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL670379.9-201ENST00000605428 253 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AC092953.2-201ENST00000608000 699 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 AL138960.2-201ENST00000625145 535 ntBASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.51□□□□□ -2.17
ZIC4Q8N9L1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 SNORA25B-201ENST00000365507 128 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 RNU6-898P-201ENST00000365627 104 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 Z98749.2-208ENST00000381646 500 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 VPS26BP1-201ENST00000417155 755 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AL353689.1-201ENST00000438895 199 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC084851.1-201ENST00000529105 249 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC024614.2-201ENST00000577584 372 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AC026271.5-201ENST00000577873 130 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 MIR3683-201ENST00000580847 82 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AL670379.6-201ENST00000603753 252 ntBASIC1.5□□□□□ -2.17
ZIC4Q8N9L1 AL670379.11-201ENST00000604059 253 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms