Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-123P-201ENST00000516163 102 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 MTCO2P4-201ENST00000517968 247 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC009902.1-201ENST00000519351 183 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 MTCYBP20-201ENST00000524239 1129 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AP003072.2-201ENST00000527756 676 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AL157871.3-201ENST00000557231 293 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC010546.1-201ENST00000569391 485 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 RPL23AP78-201ENST00000599928 470 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC007938.3-201ENST00000604965 623 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC009509.4-201ENST00000619202 509 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC138649.3-201ENST00000622154 254 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AC025034.2-201ENST00000623264 286 ntBASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.25□□□□□ -2.05
C9orf40Q8IXQ3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-181P-201ENST00000363225 107 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RNA5SP393-201ENST00000363423 117 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-1097P-201ENST00000363586 107 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-282P-201ENST00000365357 103 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 Y_RNA.367-201ENST00000365544 101 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-108P-201ENST00000365558 107 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 CISD1P1-201ENST00000393907 327 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RNA5SP181-201ENST00000410246 98 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-1025P-201ENST00000410629 104 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC098614.2-201ENST00000426040 255 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AL358075.3-201ENST00000426289 226 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AL358934.1-201ENST00000432346 324 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 MTND4P32-201ENST00000437189 1237 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RPS12P2-201ENST00000439728 269 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 BRK1P2-201ENST00000442875 223 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RPS27P27-201ENST00000498779 255 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 MRPS36P2-201ENST00000512569 299 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-445P-201ENST00000516949 107 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC025755.1-201ENST00000521306 278 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 MIR1273C-201ENST00000578669 77 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 MIR3611-201ENST00000584484 83 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC068790.2-201ENST00000602601 557 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC097065.2-201ENST00000608159 533 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC005332.10-201ENST00000612725 619 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC011890.2-201ENST00000613393 294 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC099842.1-201ENST00000619919 596 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC024940.5-201ENST00000622889 474 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC093648.1-201ENST00000623546 606 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AL157786.1-207ENST00000627771 695 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 MIR3199-2-201ENST00000636243 86 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 FO624990.1-201ENST00000636373 85 ntBASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
C9orf40Q8IXQ3 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RNA5SP289-201ENST00000362332 137 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 Y_RNA.33-201ENST00000362591 102 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-74P-201ENST00000384235 107 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-456P-201ENST00000384493 107 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 SNORA41-201ENST00000384675 132 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 MIR1-2-201ENST00000384961 85 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-750P-201ENST00000390946 107 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 DPPA3P1-201ENST00000448050 469 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 C1DP4-201ENST00000455429 424 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC026801.1-201ENST00000497178 464 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RBBP4P6-201ENST00000508098 202 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC113155.1-201ENST00000511141 769 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RPL23AP94-201ENST00000512518 302 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RN7SKP298-201ENST00000515950 94 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms