Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MIR6852-201ENST00000621699 66 ntBASIC2.17□□□□□ -2.06
CCDC50Q8IVM0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC50Q8IVM0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 SNORA75B-201ENST00000384053 137 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 USP9YP6-201ENST00000413550 854 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AC236972.1-201ENST00000433225 199 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AL008629.1-201ENST00000438615 184 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 MTND5P2-201ENST00000442927 1142 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 EEF1B2P7-201ENST00000451177 676 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 RNU6-953P-201ENST00000459154 107 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 RPS3AP22-201ENST00000488297 769 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AC116655.1-201ENST00000508324 901 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 SMURF2P1-201ENST00000514992 481 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 RNA5SP337-201ENST00000517007 109 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 PCMTD1P2-201ENST00000565017 355 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 MIR4782-201ENST00000577987 79 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 MIR15A-201ENST00000607334 83 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 MIR6134-201ENST00000617606 109 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 AC017037.3-201ENST00000625016 472 ntBASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CCDC50Q8IVM0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.15□□□□□ -2.06
CCDC50Q8IVM0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
CCDC50Q8IVM0 CDC27P3-201ENST00000635418 1910 ntBASIC2.15□□□□□ -2.06
CCDC50Q8IVM0 RNU4-1-201ENST00000363925 141 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 MIR518D-201ENST00000385014 87 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 RNU6-1025P-201ENST00000410629 104 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 BX276092.3-201ENST00000424182 230 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 RPS15AP9-201ENST00000439856 381 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 USP9YP8-201ENST00000441913 500 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC112204.1-201ENST00000502591 103 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC109927.2-201ENST00000506416 303 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC117522.2-201ENST00000510049 657 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 ACA59.2-201ENST00000517061 156 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 OR5B19P-201ENST00000531766 928 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AL353778.1-201ENST00000603149 408 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC034229.4-201ENST00000607861 441 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC069294.1-201ENST00000608397 350 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 MIR7157-201ENST00000635801 60 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC006927.3-201ENST00000638789 384 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AL359854.1-201ENST00000614203 1594 ntBASIC2.15□□□□□ -2.07
CCDC50Q8IVM0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 SNORA16B-201ENST00000364674 135 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 RNU6-1280P-201ENST00000365211 107 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 SNORA67.3-201ENST00000384366 140 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 SNORD115.1-201ENST00000391109 76 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 RN7SKP32-201ENST00000410167 303 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 XKRYP1-201ENST00000423438 492 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC010099.3-201ENST00000423896 409 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC027124.2-201ENST00000428249 105 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 XKRYP2-201ENST00000432915 492 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 RNU2-10P-201ENST00000516375 211 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 RNU6-677P-201ENST00000516914 101 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 RNU6-1315P-201ENST00000517187 99 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AP003122.4-201ENST00000530980 758 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC135279.1-201ENST00000543493 504 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 LINC00933-203ENST00000559812 219 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC026464.5-201ENST00000562497 722 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC105245.1-201ENST00000581934 244 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 uc_338.14-201ENST00000613162 166 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 AC025048.6-202ENST00000627667 438 ntBASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC50Q8IVM0 RNU6-960P-201ENST00000364056 120 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 RNU6-190P-201ENST00000384154 102 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 RNU6-39P-201ENST00000384344 107 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 RNU6-166P-201ENST00000384371 107 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 SNORA40C-201ENST00000391285 128 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 Y_RNA.608-201ENST00000410647 95 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 AC114491.1-201ENST00000416095 246 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 HIGD1AP15-201ENST00000416198 280 ntBASIC2.13□□□□□ -2.07
CCDC50Q8IVM0 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms