Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC011476.5-201ENST00000615594 130 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 uc_338.13-201ENST00000618243 179 ntBASIC4.54□□□□□ -1.68
RNF43Q68DV7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RNF43Q68DV7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF43Q68DV7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RNF43Q68DV7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF43Q68DV7 AC016588.2-201ENST00000632484 3021 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF43Q68DV7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF43Q68DV7 RNU4-90P-201ENST00000362773 141 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 RNA5SP366-201ENST00000365454 123 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 AC019155.1-201ENST00000382242 574 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 Y_RNA.405-201ENST00000383979 100 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 Y_RNA.451-201ENST00000384200 100 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 Y_RNA.524-201ENST00000384564 100 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 Y_RNA.534-201ENST00000384599 112 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 Y_RNA.561-201ENST00000384694 100 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 RNU6-417P-201ENST00000384712 107 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 MT-TC-201ENST00000387405 66 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 SNORA12.2-201ENST00000391040 156 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF43Q68DV7 PPIAP31-201ENST00000405422 495 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 BMS1P22-201ENST00000414726 313 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 AC087650.1-201ENST00000431445 468 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 ELOCP18-201ENST00000434209 337 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF43Q68DV7 U8.21-201ENST00000459536 136 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 HMGN1P11-201ENST00000508668 303 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 AC027288.2-201ENST00000553028 243 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.53□□□□□ -1.68
RNF43Q68DV7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF43Q68DV7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF43Q68DV7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RNF43Q68DV7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF43Q68DV7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF43Q68DV7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF43Q68DV7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF43Q68DV7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RNF43Q68DV7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF43Q68DV7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF43Q68DV7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF43Q68DV7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF43Q68DV7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF43Q68DV7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF43Q68DV7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 RNA5SP307-201ENST00000362863 116 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 RNU6-821P-201ENST00000390995 107 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 HMGB1P27-201ENST00000431429 603 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 RPL26P6-201ENST00000440913 438 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 RN7SKP210-201ENST00000459176 261 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 RNU6-1012P-201ENST00000516606 109 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 AP006245.1-201ENST00000522549 120 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 CASP1P1-201ENST00000526345 212 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF43Q68DV7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF43Q68DV7 MIR4659A-201ENST00000580269 81 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 MIR4444-1-201ENST00000581696 74 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 MIR4444-2-201ENST00000584390 74 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 MIR6075-201ENST00000620782 95 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF43Q68DV7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF43Q68DV7 AL451142.2-201ENST00000429076 2090 ntBASIC4.52□□□□□ -1.69
RNF43Q68DV7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF43Q68DV7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 MIR383-201ENST00000362257 73 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 RNA5SP387-201ENST00000364226 106 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 RNU1-63P-201ENST00000383902 164 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 Y_RNA.504-201ENST00000384481 104 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 RNU4-78P-201ENST00000410940 126 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 AL096701.2-201ENST00000416920 238 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 PPP1R11P2-201ENST00000423543 382 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 RPS26P47-201ENST00000427219 348 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC090774.1-201ENST00000435925 246 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 USP9YP7-201ENST00000436723 430 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 USP9YP32-201ENST00000452432 430 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC079354.2-201ENST00000453523 154 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 RPS26P15-201ENST00000488067 348 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 SUMO2P6-201ENST00000505273 288 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC074133.1-201ENST00000515696 183 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 RNA5SP497-201ENST00000516081 97 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC025755.1-201ENST00000521306 278 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms