Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 Y_RNA.687-201ENST00000516558 91 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 AC011471.1-201ENST00000585766 187 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 ZNF299P-201ENST00000406845 1804 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 RPL9P7-201ENST00000330965 580 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 RNU6-629P-201ENST00000384061 103 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 MIR218-2-201ENST00000385006 110 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 SAR1AP2-201ENST00000392696 594 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 PGBD4P6-201ENST00000421501 610 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 TOMM20P4-201ENST00000427861 435 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AC011742.1-201ENST00000431448 434 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 MYL8P-204ENST00000431574 518 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AL513043.1-201ENST00000439124 535 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 DYNLT3P2-201ENST00000442517 295 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 PCNPP5-201ENST00000452246 481 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 MTCO3P8-201ENST00000453691 755 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 RPL9P9-202ENST00000466501 579 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 RN7SL271P-201ENST00000487601 295 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AF186190.1-201ENST00000517470 480 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AC109479.2-201ENST00000517842 174 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AC005357.1-201ENST00000588399 301 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AL645944.1-201ENST00000603857 493 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AC123912.5-201ENST00000605470 343 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 RNU1-30P-201ENST00000606575 163 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 AC004852.3-201ENST00000614131 326 ntBASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
USPL1Q5W0Q7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 RNU4-50P-201ENST00000364361 141 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 MIR1251-201ENST00000408552 70 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 RPL27AP8-201ENST00000424277 446 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AL627311.1-201ENST00000431514 115 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AL353748.1-201ENST00000440753 474 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 CYCSP35-201ENST00000451978 304 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 RPL31P61-201ENST00000496160 376 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AC025445.1-201ENST00000502728 300 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 OR5D17P-201ENST00000531492 978 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AC004584.2-201ENST00000570407 410 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AC008962.1-201ENST00000605729 304 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AC006023.2-201ENST00000609916 167 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AL773545.4-201ENST00000637262 310 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 AL513478.4-201ENST00000641636 310 ntBASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USPL1Q5W0Q7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 SNORD74.4-201ENST00000364129 80 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 Y_RNA.245-201ENST00000364493 95 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 Y_RNA.552-201ENST00000384665 112 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 SNORA3C-201ENST00000408792 125 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 RNA5SP306-201ENST00000411087 107 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 Z85995.1-201ENST00000415547 335 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 AC007098.1-201ENST00000420122 367 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 CHEK2P4-201ENST00000450340 246 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 RPS24P6-201ENST00000452670 400 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 AC133473.1-201ENST00000455173 299 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 AC006600.1-201ENST00000572529 153 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 MIR3976-201ENST00000606807 139 ntBASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 AP002826.1-201ENST00000608835 315 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms