Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AC245008.1-201ENST00000608123 476 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC006566.1-201ENST00000608943 513 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC010678.1-201ENST00000614118 713 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AC025034.2-201ENST00000623264 286 ntBASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC30Q5VVM6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AL160275.3-201ENST00000423876 471 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 MYL8P-204ENST00000431574 518 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 KLF3P2-201ENST00000465138 268 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AC107626.1-201ENST00000471084 183 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 MTND4P2-201ENST00000507767 1203 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 RNU6-123P-201ENST00000516163 102 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 SNORD27.1-201ENST00000516319 72 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 RNU6-572P-201ENST00000516724 80 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 RNU6-430P-201ENST00000517078 107 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 SNORA31.19-201ENST00000517079 126 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 RNU6-685P-201ENST00000517088 95 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 HSPE1P20-201ENST00000538133 289 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 ELOCP31-201ENST00000540463 467 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AC012213.3-201ENST00000577199 777 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 MIR3913-1-201ENST00000577744 102 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 MIR6134-201ENST00000617606 109 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AC090582.1-201ENST00000636321 199 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 AC026241.1-201ENST00000517873 2142 ntBASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC30Q5VVM6 CDC27P3-201ENST00000635418 1910 ntBASIC3.15□□□□□ -1.9
CCDC30Q5VVM6 XGY1-201ENST00000381172 446 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 RNU6-74P-201ENST00000384235 107 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 RNA5SP492-201ENST00000411330 114 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 CDK8P2-201ENST00000415020 547 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 MTCO2P34-201ENST00000421994 607 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 MTCYBP5-201ENST00000423752 1135 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AL078601.1-201ENST00000444542 271 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AC079448.1-201ENST00000449377 373 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AC008571.1-201ENST00000467232 300 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AIG1P1-201ENST00000503376 148 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 MTCYBP20-201ENST00000524239 1129 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AP002963.1-201ENST00000530590 184 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AC008521.1-201ENST00000587471 187 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 RSL24D1P11-201ENST00000591045 491 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 RN7SKP299-201ENST00000606679 301 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AL589743.7-201ENST00000612637 233 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AC009509.4-201ENST00000619202 509 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AC024940.5-201ENST00000622889 474 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 AL157786.1-207ENST00000627771 695 ntBASIC3.15□□□□□ -1.91
CCDC30Q5VVM6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 Y_RNA.367-201ENST00000365544 101 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 RNU1-109P-201ENST00000383960 147 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AC104389.3-201ENST00000445629 235 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 RNU5F-8P-201ENST00000515941 111 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 RANP3-201ENST00000530970 276 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 LINC00933-203ENST00000559812 219 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AL391840.1-201ENST00000571144 367 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AL158032.1-201ENST00000605401 106 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 AC093648.1-201ENST00000623546 606 ntBASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC30Q5VVM6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC30Q5VVM6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC30Q5VVM6 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.13□□□□□ -1.91
CCDC30Q5VVM6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC30Q5VVM6 Z98749.2-208ENST00000381646 500 ntBASIC3.13□□□□□ -1.91
CCDC30Q5VVM6 MIR454-201ENST00000390180 115 ntBASIC3.13□□□□□ -1.91
CCDC30Q5VVM6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms