Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AL162578.1-201ENST00000406202 378 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AL606923.1-201ENST00000406616 190 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 Y_RNA.615-201ENST00000410769 117 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 RNU6-373P-201ENST00000411247 98 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC092809.3-201ENST00000415453 231 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 MTND3P23-201ENST00000431980 347 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 RPL36AP6-201ENST00000435770 321 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 NEFMP1-201ENST00000443423 1006 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AP004217.1-201ENST00000480579 346 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 RPL38P4-201ENST00000502376 214 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 RNU6-1038P-201ENST00000516516 104 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC022690.1-201ENST00000526681 550 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 HPRT1P3-201ENST00000539521 576 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 RPL23AP84-201ENST00000571193 464 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC138761.3-201ENST00000579993 334 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 MIR4513-201ENST00000581077 86 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC008521.1-201ENST00000587471 187 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC011712.1-201ENST00000588959 234 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AL158032.1-201ENST00000605401 106 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AC092593.1-201ENST00000515413 1815 ntBASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.42□□□□□ -1.86
TTC39AQ5SRH9 MTND4P35-201ENST00000604257 1375 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AP003122.5-201ENST00000527668 3766 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU6-1287P-201ENST00000362914 107 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU6-173P-201ENST00000364215 104 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 Y_RNA.231-201ENST00000364358 102 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 SNORA14A-201ENST00000364773 135 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU6-1060P-201ENST00000384664 107 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU2-29P-201ENST00000410423 189 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU6-193P-201ENST00000410977 107 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU6-1148P-201ENST00000410992 104 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 SRIP2-201ENST00000428470 166 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU7-180P-201ENST00000459240 63 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 HSPE1P6-201ENST00000479457 291 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RPL21P99-201ENST00000480369 423 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AL049874.1-201ENST00000489560 388 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU6-123P-201ENST00000516163 102 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 SNORA31.8-201ENST00000516327 108 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RAB11AP2-201ENST00000545905 639 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AC008962.1-201ENST00000605729 304 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 RNU6-89P-201ENST00000606519 100 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AC130324.3-201ENST00000614165 542 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AL136221.1-201ENST00000621449 509 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AC005858.4-201ENST00000623191 700 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AC073544.1-201ENST00000600110 1595 ntBASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TTC39AQ5SRH9 AL139276.1-201ENST00000311910 1001 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RNU5A-1-201ENST00000362698 116 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.72-201ENST00000362894 103 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RNU6-288P-201ENST00000363690 104 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 SNORA32.2-201ENST00000384049 122 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RNU6-38P-201ENST00000384085 107 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RNU6-767P-201ENST00000384132 107 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RNU6-14P-201ENST00000384630 106 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RNU2-41P-201ENST00000410991 178 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RN7SKP140-201ENST00000411196 284 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RPL7L1P10-201ENST00000427790 463 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC020550.1-201ENST00000447385 163 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 SNRPFP3-201ENST00000457792 225 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RNU6-333P-201ENST00000459117 107 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 HMGN2P26-201ENST00000463169 339 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RN7SL283P-201ENST00000489055 303 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC117522.3-201ENST00000507974 584 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 RNA5SP356-201ENST00000515972 94 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.689-201ENST00000516589 107 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 BTF3P12-201ENST00000519620 469 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC078814.3-201ENST00000553036 491 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 MED28P6-201ENST00000558776 231 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 FGF7P1-201ENST00000582820 288 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 ZNF861P-201ENST00000588126 639 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms