Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC116096.1-201ENST00000566804 2314 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC005183.1-201ENST00000603687 1979 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RNU6-393P-201ENST00000384475 107 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 SNORD116-29-201ENST00000384516 83 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 SNORD17-201ENST00000390930 237 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RNA5SP219-201ENST00000390940 113 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RPL21P90-201ENST00000415692 466 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AL591704.1-201ENST00000432574 275 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 Z82210.1-201ENST00000440037 231 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RPS29P31-201ENST00000446147 164 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AL360271.2-201ENST00000447710 161 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC027575.1-201ENST00000481064 460 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC091885.1-201ENST00000506658 268 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RNU2-69P-201ENST00000516061 100 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RNU6-559P-201ENST00000516151 98 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 RNA5SP291-201ENST00000517222 105 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 MIR3942-201ENST00000585264 109 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 BNIP3P25-201ENST00000596023 559 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC073539.2-201ENST00000597113 165 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AL627309.6-201ENST00000606857 840 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC040896.1-201ENST00000613819 479 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AC084781.2-201ENST00000615568 161 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 MIR7112-201ENST00000616126 65 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 SNORD39.4-201ENST00000620099 78 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 AP001148.1-201ENST00000624124 2359 ntBASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A4Q53GD3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 PWAR6-201ENST00000552334 4618 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 SNORA75B-201ENST00000384053 137 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 MIR559-201ENST00000385188 96 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AL591034.1-201ENST00000407447 340 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 MIR548P-201ENST00000408336 84 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 POLHP1-201ENST00000411806 470 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RPS3AP52-201ENST00000435639 297 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AC006539.3-201ENST00000454258 129 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 U3.44-201ENST00000458938 192 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RNA5SP310-201ENST00000459084 116 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RPS15AP34-201ENST00000487776 387 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AC139453.3-201ENST00000493276 369 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RPL30P5-201ENST00000494923 336 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RNU6-143P-201ENST00000516942 93 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AP003122.3-201ENST00000526316 255 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AC084851.1-201ENST00000529105 249 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 OR11H5P-201ENST00000554039 926 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 MIR4513-201ENST00000581077 86 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AC012119.1-201ENST00000603184 222 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AC136601.2-201ENST00000604356 474 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 AP000942.4-201ENST00000604811 241 ntBASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A4Q53GD3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SLC44A4Q53GD3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 RNU6-371P-201ENST00000364283 108 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 SNORD42.2-201ENST00000365570 69 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 RNU6-738P-201ENST00000384531 106 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 U3.26-201ENST00000391236 204 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 RNU7-66P-201ENST00000459469 62 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 AC022493.1-201ENST00000492984 337 ntBASIC3.65□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 471.6 ms