Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-611P-201ENST00000384276 104 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC58Q4VC31 RN7SKP61-201ENST00000410642 295 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AP1B1P2-201ENST00000416196 106 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AC013410.2-201ENST00000422627 201 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 ELOCP14-201ENST00000428070 331 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 MTND2P5-201ENST00000432656 1006 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 ELOCP7-201ENST00000439968 331 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AC011005.2-201ENST00000487324 359 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AC010409.1-201ENST00000487382 476 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC58Q4VC31 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC58Q4VC31 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC58Q4VC31 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC58Q4VC31 AC096586.1-201ENST00000610267 561 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC58Q4VC31 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.77□□□□□ -2.29
CCDC58Q4VC31 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CCDC58Q4VC31 RNU6-414P-201ENST00000363705 104 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 SNORD116-23-201ENST00000384645 92 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 MIR1261-201ENST00000408659 82 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.76□□□□□ -2.29
CCDC58Q4VC31 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC087477.1-201ENST00000465747 340 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC58Q4VC31 SNORD116-28-201ENST00000516123 91 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 SCARNA16.2-201ENST00000516520 172 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 RNU6-586P-201ENST00000517265 104 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC093519.1-201ENST00000566109 298 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC009977.1-201ENST00000586015 570 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC58Q4VC31 WISP1-OT1-201ENST00000602893 642 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC004009.2-201ENST00000623016 728 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC138627.2-201ENST00000624202 601 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.76□□□□□ -2.29
CCDC58Q4VC31 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CCDC58Q4VC31 AC008163.1-202ENST00000636004 2889 ntBASIC0.76□□□□□ -2.29
CCDC58Q4VC31 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CCDC58Q4VC31 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 RNU6-968P-201ENST00000384076 107 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 MIR506-201ENST00000384998 124 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 MIR100-201ENST00000385259 80 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AC004965.1-201ENST00000413033 213 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AC007435.1-201ENST00000421086 415 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 PIGFP2-201ENST00000421400 651 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AC048346.1-201ENST00000510247 144 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AL391646.1-201ENST00000603860 190 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC58Q4VC31 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AC090617.9-201ENST00000623751 147 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 AC099654.5-201ENST00000636479 350 ntBASIC0.75□□□□□ -2.29
CCDC58Q4VC31 SNORD33-201ENST00000362761 85 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 RNU1-36P-201ENST00000365130 165 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 MIR515-2-201ENST00000384883 83 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 MIR515-1-201ENST00000384884 83 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC58Q4VC31 MTND1P28-201ENST00000435623 950 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AC092170.1-201ENST00000440211 356 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC58Q4VC31 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC58Q4VC31 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.74□□□□□ -2.29
CCDC58Q4VC31 BNIP3P24-201ENST00000593398 557 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 FAM71BP1-201ENST00000604431 523 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AL158211.4-201ENST00000606988 584 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 AL021879.1-201ENST00000611756 288 ntBASIC0.74□□□□□ -2.29
CCDC58Q4VC31 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CCDC58Q4VC31 AL391987.6-201ENST00000305671 199 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 Y_RNA.245-201ENST00000364493 95 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 RNU1-39P-201ENST00000383897 165 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 TPMTP3-201ENST00000411928 735 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 USP9YP33-201ENST00000412220 421 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 AC108667.1-201ENST00000428618 249 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 RPS15AP9-201ENST00000439856 381 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 RN7SL429P-201ENST00000479090 223 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms