Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 RAC1P2-201ENST00000511164 579 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 RNU6-1332P-201ENST00000516666 104 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 AP004607.1-201ENST00000524456 203 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 AC026371.1-201ENST00000551867 419 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 AC011611.1-201ENST00000552179 197 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 AC021739.1-201ENST00000559631 174 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 FGF7P1-201ENST00000582820 288 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 MIR3672-201ENST00000584290 82 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 MIR3942-201ENST00000585264 109 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 AL138726.1-201ENST00000614873 333 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 TPTEP1-208ENST00000636884 213 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC144BQ3MJ40 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC144BQ3MJ40 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 MIR490-201ENST00000384865 128 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AL356432.1-201ENST00000405809 419 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC005019.1-201ENST00000436455 431 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC125238.1-201ENST00000448842 249 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 RNU7-170P-201ENST00000459303 61 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 RPL7P43-201ENST00000478876 753 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC103851.1-201ENST00000506833 274 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 RPL39P5-202ENST00000512505 151 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-566P-201ENST00000516790 107 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC022634.1-201ENST00000520765 532 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC025423.5-201ENST00000550230 219 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 SCOCP1-201ENST00000554676 349 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AL137849.1-201ENST00000604767 169 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC104237.2-201ENST00000612456 443 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 uc_338.15-201ENST00000615470 191 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 AC005858.4-201ENST00000623191 700 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 CDC27P3-201ENST00000635418 1910 ntBASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC144BQ3MJ40 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-37P-201ENST00000362692 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-562P-201ENST00000362731 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU1-105P-201ENST00000363470 161 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-11P-201ENST00000364234 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-7-201ENST00000364784 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-8-201ENST00000365467 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-898P-201ENST00000365627 104 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-25P-201ENST00000383873 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 SNORD116-11-201ENST00000383882 92 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-1-201ENST00000383898 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-48P-201ENST00000384161 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-36P-201ENST00000384172 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-4P-201ENST00000384205 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-5P-201ENST00000384238 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-3P-201ENST00000384314 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-16P-201ENST00000384385 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-15P-201ENST00000384534 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-2-201ENST00000384627 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-29P-201ENST00000384637 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-9-201ENST00000384776 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-33P-201ENST00000384793 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 MIR518D-201ENST00000385014 87 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 NDUFB1P1-201ENST00000435191 180 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 HMGB1P18-201ENST00000438801 619 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RPL32P28-201ENST00000443577 397 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AMD1P1-201ENST00000457220 922 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 SNORD105B-201ENST00000458770 79 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 MTND3P22-201ENST00000510932 243 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 Y_RNA.687-201ENST00000516558 91 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 Y_RNA.691-201ENST00000516611 103 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RN7SKP209-201ENST00000516888 304 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AC007458.1-201ENST00000542812 373 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AC007151.1-201ENST00000572774 483 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 MIR5195-201ENST00000583555 115 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms