Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 snoU109.4-201ENST00000458953 143 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 RN7SL330P-201ENST00000469709 307 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 RNA5SP208-201ENST00000516156 78 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 RN7SKP60-201ENST00000516985 239 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 RAB9BP1-201ENST00000519581 626 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 HMGN1P28-201ENST00000521340 364 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 AC007991.1-201ENST00000522680 631 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 AC007566.2-201ENST00000603642 413 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 AC009779.6-201ENST00000603972 165 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM12Q3MHD2 AL138825.1-201ENST00000618587 192 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 AL159153.1-201ENST00000619688 317 ntBASIC3.71□□□□□ -1.82
LSM12Q3MHD2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM12Q3MHD2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LSM12Q3MHD2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM12Q3MHD2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM12Q3MHD2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
LSM12Q3MHD2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RNA5SP443-201ENST00000363083 132 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 Y_RNA.150-201ENST00000363562 102 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RNU6-338P-201ENST00000383888 105 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RNU6-190P-201ENST00000384154 102 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 U3.42-201ENST00000408746 214 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RNU2-33P-201ENST00000410344 192 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AP000275.1-201ENST00000411943 390 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RPL21P38-201ENST00000418090 167 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 PCMTD1P1-201ENST00000455560 355 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RNU7-169P-201ENST00000459456 61 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AC018437.1-201ENST00000492214 406 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RAC1P2-201ENST00000511164 579 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 SNORA31.9-201ENST00000516429 84 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 RNU6-182P-201ENST00000516970 105 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AC109329.1-201ENST00000518744 317 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AP003733.2-201ENST00000529409 171 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AC130289.1-201ENST00000577321 73 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 MIR4700-201ENST00000578311 74 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 AC091903.1-201ENST00000624322 454 ntBASIC3.7□□□□□ -1.82
LSM12Q3MHD2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.7□□□□□ -1.82
LSM12Q3MHD2 CEP170P1-201ENST00000502249 4587 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 RNY1P16-201ENST00000363063 111 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 Y_RNA.478-201ENST00000384358 107 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AL590704.1-201ENST00000402856 794 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 RNU6-130P-201ENST00000411112 103 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AL691449.1-201ENST00000426570 421 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 SDAD1P3-201ENST00000427380 333 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC073063.1-201ENST00000434352 607 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 SNORA71B-202ENST00000439232 272 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC008264.1-201ENST00000447612 367 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 RPL21P41-201ENST00000459863 264 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 RPL23AP62-201ENST00000463396 453 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 RPL23AP14-201ENST00000468281 468 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 TRBVB-201ENST00000477100 408 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC098869.1-201ENST00000481627 292 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 RPL7P23-201ENST00000493874 747 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 SNORA81.3-201ENST00000517283 198 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 MRPL49P2-201ENST00000521066 465 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC008489.1-201ENST00000524271 483 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 MIR4738-201ENST00000579134 87 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC023575.1-201ENST00000580510 358 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 MIR3939-201ENST00000582614 106 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC104763.2-201ENST00000604179 382 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 RNU6-85P-201ENST00000605989 107 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AP001282.2-201ENST00000616149 309 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC130454.1-201ENST00000622948 401 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 DDX10P1-201ENST00000448545 1933 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 AC073073.2-201ENST00000609827 2578 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
LSM12Q3MHD2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LSM12Q3MHD2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LSM12Q3MHD2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LSM12Q3MHD2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.68□□□□□ -1.82
LSM12Q3MHD2 RNU6-288P-201ENST00000363690 104 ntBASIC3.68□□□□□ -1.82
LSM12Q3MHD2 SNORD27-201ENST00000363981 72 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms