Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RFX4Q33E94 U3.12-201ENST00000364498 214 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 SNORA26.8-201ENST00000391306 124 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 Y_RNA.598-201ENST00000410480 95 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.01□□□□□ -2.09
RFX4Q33E94 AC006366.1-201ENST00000422002 759 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AL591212.2-201ENST00000433923 257 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.01□□□□□ -2.09
RFX4Q33E94 MTND6P13-201ENST00000443510 523 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 MTATP6P7-201ENST00000453315 681 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.01□□□□□ -2.09
RFX4Q33E94 AL121769.1-201ENST00000469473 401 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 MTND3P7-201ENST00000474435 343 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.01□□□□□ -2.09
RFX4Q33E94 RNU5F-8P-201ENST00000515941 111 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 Y_RNA.672-201ENST00000516289 104 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 RNA5SP200-201ENST00000516360 103 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 RNU6-1183P-201ENST00000517054 60 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.01□□□□□ -2.09
RFX4Q33E94 AC022616.3-201ENST00000523940 148 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AP001646.1-201ENST00000527936 915 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.01□□□□□ -2.09
RFX4Q33E94 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.01□□□□□ -2.09
RFX4Q33E94 AC006199.1-201ENST00000548728 219 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 MRPS36P5-201ENST00000551909 298 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 OR11H5P-201ENST00000554039 926 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 MIR3162-201ENST00000581818 82 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.01□□□□□ -2.09
RFX4Q33E94 BNIP3P9-201ENST00000603714 553 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AC009314.1-201ENST00000603871 304 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RFX4Q33E94 DUXAP9-208ENST00000622815 614 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AC019226.2-201ENST00000625973 424 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 AL512643.1-201ENST00000635735 524 ntBASIC2.01□□□□□ -2.09
RFX4Q33E94 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RFX4Q33E94 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.01□□□□□ -2.09
RFX4Q33E94 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
RFX4Q33E94 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RFX4Q33E94 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
RFX4Q33E94 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
RFX4Q33E94 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2□□□□□ -2.09
RFX4Q33E94 Y_RNA.22-201ENST00000362492 102 ntBASIC2□□□□□ -2.09
RFX4Q33E94 U8.3-201ENST00000363321 132 ntBASIC2□□□□□ -2.09
RFX4Q33E94 SNORA75B-201ENST00000384053 137 ntBASIC2□□□□□ -2.09
RFX4Q33E94 RPL23AP32-201ENST00000395315 459 ntBASIC2□□□□□ -2.09
RFX4Q33E94 U3.40-201ENST00000408706 208 ntBASIC2□□□□□ -2.09
RFX4Q33E94 HNRNPDLP1-201ENST00000412834 550 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC114491.1-201ENST00000416095 246 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2□□□□□ -2.09
RFX4Q33E94 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2□□□□□ -2.09
RFX4Q33E94 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2□□□□□ -2.09
RFX4Q33E94 RPS6P15-201ENST00000431996 751 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2□□□□□ -2.09
RFX4Q33E94 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2□□□□□ -2.09
RFX4Q33E94 AC119618.1-201ENST00000434191 222 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC104850.1-201ENST00000435940 476 ntBASIC2□□□□□ -2.09
RFX4Q33E94 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2□□□□□ -2.09
RFX4Q33E94 MTND1P26-201ENST00000440488 538 ntBASIC2□□□□□ -2.09
RFX4Q33E94 USP9YP15-201ENST00000442391 422 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2□□□□□ -2.09
RFX4Q33E94 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2□□□□□ -2.09
RFX4Q33E94 AC093899.1-201ENST00000457984 376 ntBASIC2□□□□□ -2.09
RFX4Q33E94 RNU6-953P-201ENST00000459154 107 ntBASIC2□□□□□ -2.09
RFX4Q33E94 MTCO2P6-201ENST00000463134 685 ntBASIC2□□□□□ -2.09
RFX4Q33E94 MTCO2P29-201ENST00000465212 189 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2□□□□□ -2.09
RFX4Q33E94 AC109927.2-201ENST00000506416 303 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2□□□□□ -2.09
RFX4Q33E94 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2□□□□□ -2.09
RFX4Q33E94 RNU7-51P-201ENST00000516560 62 ntBASIC2□□□□□ -2.09
RFX4Q33E94 Y_RNA.689-201ENST00000516589 107 ntBASIC2□□□□□ -2.09
RFX4Q33E94 RNU6-677P-201ENST00000516914 101 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC011979.2-201ENST00000527568 352 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2□□□□□ -2.09
RFX4Q33E94 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2□□□□□ -2.09
RFX4Q33E94 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2□□□□□ -2.09
RFX4Q33E94 MTND3P12-201ENST00000559068 328 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2□□□□□ -2.09
RFX4Q33E94 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2□□□□□ -2.09
RFX4Q33E94 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2□□□□□ -2.09
RFX4Q33E94 LRRC37A5P-203ENST00000580181 585 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2□□□□□ -2.09
RFX4Q33E94 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
RFX4Q33E94 MIR4448-201ENST00000584360 86 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
RFX4Q33E94 NIFKP6-201ENST00000598115 845 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AL391813.1-201ENST00000603098 260 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AL355598.1-201ENST00000604169 202 ntBASIC2□□□□□ -2.09
RFX4Q33E94 APOOP1-201ENST00000604695 592 ntBASIC2□□□□□ -2.09
RFX4Q33E94 MIR15A-201ENST00000607334 83 ntBASIC2□□□□□ -2.09
RFX4Q33E94 FRG1KP-201ENST00000623592 341 ntBASIC2□□□□□ -2.09
RFX4Q33E94 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2□□□□□ -2.09
RFX4Q33E94 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.99□□□□□ -2.09
RFX4Q33E94 RNU6-190P-201ENST00000384154 102 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 RNU6-297P-201ENST00000384636 107 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AL049545.1-201ENST00000401856 572 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC096649.2-201ENST00000416186 393 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms