Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PPP1R11P2-201ENST00000423543 382 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 MTND4LP7-201ENST00000431728 294 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 FABP5P14-201ENST00000437273 393 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 AC002381.1-201ENST00000447049 280 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 MTND5P8-201ENST00000449817 1083 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 CYP2C59P-201ENST00000457790 269 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 RNU6-1132P-201ENST00000459214 107 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 RNU6-551P-201ENST00000516661 103 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 AL132857.1-201ENST00000555180 708 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 MTCYBP22-201ENST00000603788 447 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 AC004853.1-201ENST00000604902 698 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 U1.36-201ENST00000620684 176 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 AC004009.2-201ENST00000623016 728 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 U6.101-201ENST00000637707 76 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 Y_RNA.67-201ENST00000362870 100 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 RNU6-492P-201ENST00000363035 104 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 RNU6-657P-201ENST00000383904 107 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 RNY1P4-201ENST00000384595 115 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 SNORD65C-201ENST00000390962 71 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 RNU1-78P-201ENST00000391248 165 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 AL109755.1-201ENST00000401791 649 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 RPL21P90-201ENST00000415692 466 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 MTATP6P27-201ENST00000416987 621 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
RFX7Q2KHR2 AL445305.1-201ENST00000432577 575 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 MTND2P5-201ENST00000432656 1006 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 ARPC3P5-201ENST00000448802 534 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.16□□□□□ -2.22
RFX7Q2KHR2 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.16□□□□□ -2.22
RFX7Q2KHR2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.16□□□□□ -2.22
RFX7Q2KHR2 NACAP3-201ENST00000552100 481 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 RPL21P5-201ENST00000554662 472 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 uc_338.14-201ENST00000613162 166 ntBASIC1.16□□□□□ -2.22
RFX7Q2KHR2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
RFX7Q2KHR2 Y_RNA.374-201ENST00000365606 101 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 USP9YP19-201ENST00000412165 485 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 USP9YP13-201ENST00000417797 480 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 POLR2J4-204ENST00000418424 324 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AC092634.6-201ENST00000418558 192 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.15□□□□□ -2.23
RFX7Q2KHR2 VN1R42P-201ENST00000424651 344 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.15□□□□□ -2.23
RFX7Q2KHR2 RAC1P8-201ENST00000427086 527 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.15□□□□□ -2.23
RFX7Q2KHR2 RSU1P2-202ENST00000437884 485 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AC104229.1-201ENST00000561364 255 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AC005730.3-201ENST00000583067 366 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AC002545.1-201ENST00000592511 181 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AC133794.1-201ENST00000602731 914 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AL391813.1-201ENST00000603098 260 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 AL391646.1-201ENST00000603860 190 ntBASIC1.15□□□□□ -2.23
RFX7Q2KHR2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RFX7Q2KHR2 RNU6-839P-201ENST00000363347 108 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 RNU6-516P-201ENST00000411381 104 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 BPY2DP-201ENST00000422208 265 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AL354941.1-201ENST00000438600 464 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AL022238.1-201ENST00000442557 355 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC099513.1-201ENST00000490423 301 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 BOLA3P3-201ENST00000505182 232 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC010460.2-201ENST00000509054 677 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC006199.1-201ENST00000548728 219 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC079148.1-201ENST00000565944 819 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 RN7SL793P-201ENST00000583259 296 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC011451.2-201ENST00000604303 598 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AP003973.1-201ENST00000604639 691 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC022202.1-201ENST00000613515 211 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 AC013476.2-201ENST00000614456 459 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 MTND1P37-201ENST00000636562 264 ntBASIC1.14□□□□□ -2.23
RFX7Q2KHR2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
RFX7Q2KHR2 RNU6-1066P-201ENST00000363573 105 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
RFX7Q2KHR2 RNU6-748P-201ENST00000384648 107 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 MIR561-201ENST00000385216 97 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 RNU2-33P-201ENST00000410344 192 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 TPMTP3-201ENST00000411928 735 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.13□□□□□ -2.23
RFX7Q2KHR2 MTCYBP38-201ENST00000417160 1123 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 FAM204CP-201ENST00000424489 642 ntBASIC1.13□□□□□ -2.23
RFX7Q2KHR2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms