Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.86□□□□□ -2.27
CPSF1Q10570 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.86□□□□□ -2.27
CPSF1Q10570 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.86□□□□□ -2.27
CPSF1Q10570 Z82210.1-201ENST00000440037 231 ntBASIC0.86□□□□□ -2.27
CPSF1Q10570 RNU6-1256P-201ENST00000516539 103 ntBASIC0.86□□□□□ -2.27
CPSF1Q10570 AC004217.3-201ENST00000551552 878 ntBASIC0.86□□□□□ -2.27
CPSF1Q10570 AC009974.1-201ENST00000608881 455 ntBASIC0.86□□□□□ -2.27
CPSF1Q10570 FTX_3.1-201ENST00000610451 147 ntBASIC0.86□□□□□ -2.27
CPSF1Q10570 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.85□□□□□ -2.27
CPSF1Q10570 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.85□□□□□ -2.27
CPSF1Q10570 MIR515-2-201ENST00000384883 83 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 MIR515-1-201ENST00000384884 83 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 MIR888-201ENST00000401186 77 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 RNU2-47P-201ENST00000410649 186 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 AC018630.2-202ENST00000422992 927 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.85□□□□□ -2.27
CPSF1Q10570 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.85□□□□□ -2.27
CPSF1Q10570 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.85□□□□□ -2.27
CPSF1Q10570 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.85□□□□□ -2.27
CPSF1Q10570 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CPSF1Q10570 AC034114.1-201ENST00000520293 285 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.85□□□□□ -2.27
CPSF1Q10570 AC092451.2-201ENST00000538746 658 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 CR383656.7-201ENST00000548164 174 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.85□□□□□ -2.27
CPSF1Q10570 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CPSF1Q10570 DUXAP1-201ENST00000556632 463 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 AL356432.3-201ENST00000568952 465 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 AC026271.5-201ENST00000577873 130 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 AL031176.1-201ENST00000604554 466 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 AC008945.2-201ENST00000606056 604 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 DUXAP10-204ENST00000612052 616 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 AC099842.1-201ENST00000619919 596 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.85□□□□□ -2.27
CPSF1Q10570 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
CPSF1Q10570 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CPSF1Q10570 MIR330-201ENST00000362196 94 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 RNU6-251P-201ENST00000363235 104 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 Y_RNA.251-201ENST00000364551 99 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 RNU6-673P-201ENST00000365084 104 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 AC009310.1-201ENST00000414414 451 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 AC092628.1-201ENST00000436250 252 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.84□□□□□ -2.27
CPSF1Q10570 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.84□□□□□ -2.27
CPSF1Q10570 MIR4422-201ENST00000581938 83 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 uc_338.14-201ENST00000613162 166 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.84□□□□□ -2.27
CPSF1Q10570 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CPSF1Q10570 AP003400.6-201ENST00000624698 740 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 MIR924-201ENST00000638017 53 ntBASIC0.84□□□□□ -2.27
CPSF1Q10570 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
CPSF1Q10570 AL359854.1-201ENST00000614203 1594 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 RNU6-543P-201ENST00000362576 108 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 RNU6-884P-201ENST00000363889 107 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 MIR514A1-201ENST00000385133 98 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 MIR561-201ENST00000385216 97 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CPSF1Q10570 AL139098.1-201ENST00000407291 389 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 PIGPP2-201ENST00000411569 458 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.83□□□□□ -2.28
CPSF1Q10570 BPY2DP-201ENST00000422208 265 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 ZNF965P-201ENST00000432501 817 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 AL354941.1-201ENST00000438600 464 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.83□□□□□ -2.28
CPSF1Q10570 CYP2C59P-201ENST00000457790 269 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.83□□□□□ -2.28
CPSF1Q10570 ZNF705CP-201ENST00000530515 889 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.83□□□□□ -2.28
CPSF1Q10570 AC027104.1-201ENST00000563702 681 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.83□□□□□ -2.28
CPSF1Q10570 AC243829.3-201ENST00000622177 108 ntBASIC0.83□□□□□ -2.28
CPSF1Q10570 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CPSF1Q10570 RNU6-716P-201ENST00000365621 103 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 RNU6-140P-201ENST00000384566 108 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CPSF1Q10570 RNU2-15P-201ENST00000410692 191 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 BTF3P8-201ENST00000414577 526 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF1Q10570 ZNF863P-201ENST00000426746 417 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 HMGN1P33-201ENST00000432945 451 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 MTND5P15-201ENST00000434246 349 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 USP9YP35-201ENST00000435696 412 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF1Q10570 DYNLT3P2-201ENST00000442517 295 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF1Q10570 AC022483.1-201ENST00000514020 567 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CPSF1Q10570 RNU6-496P-201ENST00000516145 99 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF1Q10570 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.82□□□□□ -2.28
CPSF1Q10570 NIFKP6-201ENST00000598115 845 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 AC079610.2-201ENST00000604818 690 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
CPSF1Q10570 AC091925.1-201ENST00000623204 462 ntBASIC0.82□□□□□ -2.28
CPSF1Q10570 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CPSF1Q10570 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CPSF1Q10570 UBE2V1P4-201ENST00000425374 344 ntBASIC0.81□□□□□ -2.28
CPSF1Q10570 AC245047.4-201ENST00000433189 144 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms