Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX4Q06945 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX4Q06945 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SOX4Q06945 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.46□□□□□ -1.7
SOX4Q06945 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX4Q06945 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
SOX4Q06945 RNU6-102P-201ENST00000384485 104 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 Y_RNA.623-201ENST00000411128 95 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 AC009237.10-201ENST00000414112 510 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 AC017079.2-201ENST00000416102 485 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SOX4Q06945 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.46□□□□□ -1.7
SOX4Q06945 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.46□□□□□ -1.7
SOX4Q06945 ANXA2P1-201ENST00000505539 926 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX4Q06945 RNU6-1012P-201ENST00000516606 109 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SOX4Q06945 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX4Q06945 MIR548AI-201ENST00000579940 88 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX4Q06945 AL139395.1-201ENST00000603662 160 ntBASIC4.46□□□□□ -1.7
SOX4Q06945 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX4Q06945 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX4Q06945 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX4Q06945 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX4Q06945 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX4Q06945 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX4Q06945 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SOX4Q06945 OR4G2P-202ENST00000641004 1759 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX4Q06945 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX4Q06945 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX4Q06945 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX4Q06945 RNU6-227P-201ENST00000362865 103 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 RNU6-428P-201ENST00000362942 107 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX4Q06945 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX4Q06945 MTCO1P39-201ENST00000426148 480 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 AC091390.3-201ENST00000426478 338 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX4Q06945 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX4Q06945 AL358472.1-201ENST00000431295 329 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 AC013470.1-201ENST00000453438 462 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 RPL21P13-201ENST00000488305 481 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SOX4Q06945 RNU6-861P-201ENST00000516745 106 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 AC025755.1-201ENST00000521306 278 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 AC100770.1-201ENST00000532310 322 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX4Q06945 AC090617.7-201ENST00000623952 126 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX4Q06945 AL592437.2-201ENST00000421655 2434 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 HAUS6P2-201ENST00000433254 2404 ntBASIC4.45□□□□□ -1.7
SOX4Q06945 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX4Q06945 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX4Q06945 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SOX4Q06945 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX4Q06945 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX4Q06945 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SOX4Q06945 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX4Q06945 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
SOX4Q06945 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX4Q06945 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX4Q06945 Y_RNA.123-201ENST00000363338 102 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 RNU6-290P-201ENST00000365212 101 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 MIR10A-201ENST00000385043 110 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 MIR514A1-201ENST00000385133 98 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SOX4Q06945 AL033519.2-201ENST00000403958 392 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AC079780.1-201ENST00000428259 207 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 RPL21P40-201ENST00000428586 483 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AL627311.1-201ENST00000431514 115 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 SEPT14P8-201ENST00000508026 178 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AC074198.2-201ENST00000508153 258 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 RNU6-1278P-201ENST00000516130 107 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX4Q06945 IGLV3-26-201ENST00000520756 302 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX4Q06945 MRPS36P4-201ENST00000534436 298 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AC005476.1-201ENST00000554427 397 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX4Q06945 RN7SL703P-201ENST00000578485 302 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 MIR4659A-201ENST00000580269 81 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX4Q06945 AC005046.1-201ENST00000608515 625 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AC011476.5-201ENST00000615594 130 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 LINC00901.1-201ENST00000617252 152 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 AC097372.5-201ENST00000623665 376 ntBASIC4.44□□□□□ -1.7
SOX4Q06945 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX4Q06945 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX4Q06945 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX4Q06945 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX4Q06945 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX4Q06945 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX4Q06945 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX4Q06945 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms