Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.83□□□□□ -1.8
IRF9Q00978 SUB1P3-201ENST00000564581 315 ntBASIC3.83□□□□□ -1.8
IRF9Q00978 CYCSP39-201ENST00000565821 309 ntBASIC3.83□□□□□ -1.8
IRF9Q00978 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
IRF9Q00978 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
IRF9Q00978 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.83□□□□□ -1.8
IRF9Q00978 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
IRF9Q00978 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.82□□□□□ -1.8
IRF9Q00978 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
IRF9Q00978 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
IRF9Q00978 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
IRF9Q00978 AL356057.3-201ENST00000402607 340 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 AL591034.2-201ENST00000402839 359 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 RPL23AP48-201ENST00000406913 488 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 RNU6-985P-201ENST00000410182 104 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.82□□□□□ -1.8
IRF9Q00978 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.82□□□□□ -1.8
IRF9Q00978 AC004975.1-201ENST00000428733 208 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 AL353997.1-201ENST00000432936 108 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.82□□□□□ -1.8
IRF9Q00978 AC099799.1-201ENST00000439809 192 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 PPIAP15-201ENST00000479662 484 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 RPL17P19-201ENST00000489069 552 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.82□□□□□ -1.8
IRF9Q00978 AC022447.4-201ENST00000504053 364 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 AC116655.1-201ENST00000508324 901 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 RNU6-1183P-201ENST00000517054 60 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
IRF9Q00978 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.82□□□□□ -1.8
IRF9Q00978 CBX3P8-201ENST00000532412 525 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.82□□□□□ -1.8
IRF9Q00978 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.82□□□□□ -1.8
IRF9Q00978 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.82□□□□□ -1.8
IRF9Q00978 AC023043.4-201ENST00000612081 449 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
IRF9Q00978 AL078596.1-201ENST00000624856 447 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.82□□□□□ -1.8
IRF9Q00978 FAM35BP-202ENST00000497389 3337 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 AC007656.2-201ENST00000624902 4547 ntBASIC3.82□□□□□ -1.8
IRF9Q00978 RLIMP1-201ENST00000339626 1680 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
IRF9Q00978 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
IRF9Q00978 RNU6-428P-201ENST00000362942 107 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 Y_RNA.80-201ENST00000362996 102 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RNU6-778P-201ENST00000363269 103 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RNA5SP479-201ENST00000364858 117 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 Z98749.2-208ENST00000381646 500 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 MIR521-1-201ENST00000384902 87 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RPL21P17-201ENST00000397467 475 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RNU2-37P-201ENST00000410695 177 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RNA5SP31-201ENST00000411144 127 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.81□□□□□ -1.8
IRF9Q00978 MRPS18CP6-201ENST00000423587 223 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RPL37P4-201ENST00000448908 268 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 FO393415.2-201ENST00000480085 343 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 AC021146.2-201ENST00000504736 556 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RAC1P2-201ENST00000511164 579 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RNU6-377P-201ENST00000515965 102 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 RNU1-61P-201ENST00000516107 151 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 MRPL49P2-201ENST00000521066 465 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 AC007991.1-201ENST00000522680 631 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 AC005476.1-201ENST00000554427 397 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.81□□□□□ -1.8
IRF9Q00978 SRGNP1-201ENST00000603392 451 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 MIR6867-201ENST00000610636 67 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.81□□□□□ -1.8
IRF9Q00978 AC048347.1-201ENST00000624621 427 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 U4.7-201ENST00000638126 106 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 AC119674.1-207ENST00000641355 633 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
IRF9Q00978 SRP72P2-201ENST00000344851 1979 ntBASIC3.81□□□□□ -1.8
IRF9Q00978 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.81□□□□□ -1.8
IRF9Q00978 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
IRF9Q00978 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
IRF9Q00978 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
IRF9Q00978 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
IRF9Q00978 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.8□□□□□ -1.8
IRF9Q00978 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.8□□□□□ -1.8
IRF9Q00978 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.8□□□□□ -1.8
IRF9Q00978 Y_RNA.48-201ENST00000362710 103 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 RNU6-78P-201ENST00000362897 107 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 Y_RNA.144-201ENST00000363521 113 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 RNU1-73P-201ENST00000383971 164 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 RNU6-1105P-201ENST00000384774 107 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 MIR888-201ENST00000401186 77 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.8□□□□□ -1.8
IRF9Q00978 MTCYBP10-201ENST00000424905 650 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 AL358176.2-201ENST00000425769 204 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.8□□□□□ -1.8
IRF9Q00978 NUTF2P7-201ENST00000453086 375 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.8□□□□□ -1.8
IRF9Q00978 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.8□□□□□ -1.8
IRF9Q00978 AP005902.1-201ENST00000521358 186 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 GNAI2P1-201ENST00000541815 315 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 OR8R1P-201ENST00000543943 764 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.8□□□□□ -1.8
IRF9Q00978 AC092447.9-201ENST00000603395 144 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 AC008962.1-201ENST00000605729 304 ntBASIC3.8□□□□□ -1.8
IRF9Q00978 AC005014.2-201ENST00000607795 599 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms