Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AK3P2-201ENST00000507976 429 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 FTH1P9-201ENST00000513251 355 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 AC109479.2-201ENST00000517842 174 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.49□□□□□ -1.85
CLRN1P58418 GNAI2P1-201ENST00000541815 315 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.49□□□□□ -1.85
CLRN1P58418 AC008269.2-201ENST00000561915 1105 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 ZNF192P1-203ENST00000565888 810 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 AC120057.2-201ENST00000571520 271 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 MIR3671-201ENST00000580455 88 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 FTX_3.1-201ENST00000610451 147 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 MIR6867-201ENST00000610636 67 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN1P58418 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.49□□□□□ -1.85
CLRN1P58418 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN1P58418 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.49□□□□□ -1.85
CLRN1P58418 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CLRN1P58418 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN1P58418 MTND5P1-201ENST00000445440 1375 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.49□□□□□ -1.85
CLRN1P58418 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.48□□□□□ -1.85
CLRN1P58418 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.48□□□□□ -1.85
CLRN1P58418 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AC091812.1-201ENST00000432235 1948 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN1P58418 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN1P58418 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.48□□□□□ -1.85
CLRN1P58418 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN1P58418 RNY1P16-201ENST00000363063 111 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 Y_RNA.455-201ENST00000384230 98 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 Y_RNA.533-201ENST00000384596 114 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 Y_RNA.557-201ENST00000384680 107 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AL591034.2-201ENST00000402839 359 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 HMGB3P2-201ENST00000411913 584 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.48□□□□□ -1.85
CLRN1P58418 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 TBCAP1-201ENST00000436520 327 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.48□□□□□ -1.85
CLRN1P58418 AL500522.2-201ENST00000448562 343 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AC013470.1-201ENST00000453438 462 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 U8.21-201ENST00000459536 136 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.48□□□□□ -1.85
CLRN1P58418 RNU6-703P-201ENST00000516946 107 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AP005902.1-201ENST00000521358 186 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.48□□□□□ -1.85
CLRN1P58418 AC007991.1-201ENST00000522680 631 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 COX6CP5-201ENST00000527162 228 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN1P58418 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.48□□□□□ -1.85
CLRN1P58418 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.48□□□□□ -1.85
CLRN1P58418 MIR4782-201ENST00000577987 79 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.48□□□□□ -1.85
CLRN1P58418 AL158827.2-201ENST00000602494 330 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 SNORD58B-201ENST00000607313 66 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 MIR4727-201ENST00000622232 55 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 AL691447.3-201ENST00000635020 330 ntBASIC3.48□□□□□ -1.85
CLRN1P58418 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLRN1P58418 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CLRN1P58418 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.48□□□□□ -1.85
CLRN1P58418 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN1P58418 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLRN1P58418 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CLRN1P58418 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.48□□□□□ -1.85
CLRN1P58418 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CLRN1P58418 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN1P58418 AC018555.1-201ENST00000567548 1980 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CLRN1P58418 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN1P58418 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN1P58418 SPRR2C-201ENST00000290702 219 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CLRN1P58418 Y_RNA.39-201ENST00000362620 98 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 RNU5E-7P-201ENST00000365290 117 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 RNU6-72P-201ENST00000384285 79 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 RNU6-658P-201ENST00000384606 106 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLRN1P58418 RNU6-1156P-201ENST00000410365 100 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 RNA5SP39-201ENST00000411245 120 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.47□□□□□ -1.85
CLRN1P58418 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
CLRN1P58418 NUP35P1-201ENST00000422734 947 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC096644.2-201ENST00000429278 159 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.47□□□□□ -1.85
CLRN1P58418 MTCYBP9-201ENST00000431021 303 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.47□□□□□ -1.85
CLRN1P58418 HIGD1AP2-201ENST00000446367 280 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AL162151.2-201ENST00000448875 158 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.47□□□□□ -1.85
CLRN1P58418 AL353752.1-201ENST00000454946 260 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.47□□□□□ -1.85
CLRN1P58418 RNU6-377P-201ENST00000515965 102 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 RNU1-103P-201ENST00000516502 125 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 IGKV2D-19-201ENST00000523346 262 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.47□□□□□ -1.85
CLRN1P58418 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.47□□□□□ -1.85
CLRN1P58418 H3F3AP1-201ENST00000559984 334 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.47□□□□□ -1.85
CLRN1P58418 CYCSP39-201ENST00000565821 309 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.47□□□□□ -1.85
CLRN1P58418 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms