Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 U6.42-201ENST00000618440 107 ntBASIC2.97□□□□□ -1.93
CDH8P55286 AL158209.2-201ENST00000619266 216 ntBASIC2.97□□□□□ -1.93
CDH8P55286 AC068137.4-201ENST00000638485 296 ntBASIC2.97□□□□□ -1.93
CDH8P55286 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH8P55286 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH8P55286 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDH8P55286 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.97□□□□□ -1.93
CDH8P55286 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH8P55286 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH8P55286 Z98749.2-208ENST00000381646 500 ntBASIC2.96□□□□□ -1.94
CDH8P55286 SNORD21-201ENST00000383953 95 ntBASIC2.96□□□□□ -1.94
CDH8P55286 MIR578-201ENST00000384828 96 ntBASIC2.96□□□□□ -1.94
CDH8P55286 MIR181B1-201ENST00000385240 110 ntBASIC2.96□□□□□ -1.94
CDH8P55286 RNU4-46P-201ENST00000410818 138 ntBASIC2.96□□□□□ -1.94
CDH8P55286 AL139281.1-201ENST00000422120 335 ntBASIC2.96□□□□□ -1.94
CDH8P55286 RPL7P37-201ENST00000425095 738 ntBASIC2.96□□□□□ -1.94
CDH8P55286 MTCO3P30-201ENST00000426425 670 ntBASIC2.96□□□□□ -1.94
CDH8P55286 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH8P55286 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH8P55286 GMFBP1-201ENST00000467831 427 ntBASIC2.96□□□□□ -1.94
CDH8P55286 RPL31P41-201ENST00000477967 372 ntBASIC2.96□□□□□ -1.94
CDH8P55286 RPL9P6-201ENST00000492764 598 ntBASIC2.96□□□□□ -1.94
CDH8P55286 RPL23AP94-201ENST00000512518 302 ntBASIC2.96□□□□□ -1.94
CDH8P55286 SNORD19.2-201ENST00000516978 73 ntBASIC2.96□□□□□ -1.94
CDH8P55286 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH8P55286 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH8P55286 AP003034.1-201ENST00000534621 422 ntBASIC2.96□□□□□ -1.94
CDH8P55286 AC245505.1-201ENST00000556398 224 ntBASIC2.96□□□□□ -1.94
CDH8P55286 LINC00933-203ENST00000559812 219 ntBASIC2.96□□□□□ -1.94
CDH8P55286 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH8P55286 RPL12P50-201ENST00000603116 116 ntBASIC2.96□□□□□ -1.94
CDH8P55286 AC087241.4-201ENST00000612441 480 ntBASIC2.96□□□□□ -1.94
CDH8P55286 AC010338.1-201ENST00000621823 717 ntBASIC2.96□□□□□ -1.94
CDH8P55286 MIR6863-201ENST00000636112 90 ntBASIC2.96□□□□□ -1.94
CDH8P55286 AC010889.1-201ENST00000566193 2666 ntBASIC2.96□□□□□ -1.94
CDH8P55286 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
CDH8P55286 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH8P55286 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH8P55286 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH8P55286 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH8P55286 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.95□□□□□ -1.94
CDH8P55286 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDH8P55286 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH8P55286 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH8P55286 RNU6-371P-201ENST00000364283 108 ntBASIC2.95□□□□□ -1.94
CDH8P55286 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AC068050.1-201ENST00000394891 380 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AL138827.1-201ENST00000402666 306 ntBASIC2.95□□□□□ -1.94
CDH8P55286 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AL353193.1-201ENST00000421444 268 ntBASIC2.95□□□□□ -1.94
CDH8P55286 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH8P55286 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH8P55286 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH8P55286 AC009296.1-201ENST00000443146 155 ntBASIC2.95□□□□□ -1.94
CDH8P55286 RPL23AP20-201ENST00000447965 421 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AL583843.1-201ENST00000456070 346 ntBASIC2.95□□□□□ -1.94
CDH8P55286 RNU7-63P-201ENST00000459054 62 ntBASIC2.95□□□□□ -1.94
CDH8P55286 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH8P55286 AC091435.1-201ENST00000505442 584 ntBASIC2.95□□□□□ -1.94
CDH8P55286 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH8P55286 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH8P55286 MRPS36P2-201ENST00000512569 299 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH8P55286 Y_RNA.655-201ENST00000515919 96 ntBASIC2.95□□□□□ -1.94
CDH8P55286 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH8P55286 AC138761.3-201ENST00000579993 334 ntBASIC2.95□□□□□ -1.94
CDH8P55286 MIR5692A1-201ENST00000580523 69 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AC008752.3-201ENST00000588113 712 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AC010620.2-201ENST00000600135 313 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AC004832.5-201ENST00000608677 401 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AC017083.3-201ENST00000609955 700 ntBASIC2.95□□□□□ -1.94
CDH8P55286 MIR6134-201ENST00000617606 109 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH8P55286 AC124864.2-201ENST00000624736 186 ntBASIC2.95□□□□□ -1.94
CDH8P55286 AC084035.1-201ENST00000634543 607 ntBASIC2.95□□□□□ -1.94
CDH8P55286 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CDH8P55286 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CDH8P55286 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH8P55286 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CDH8P55286 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH8P55286 CDC27P3-201ENST00000635418 1910 ntBASIC2.94□□□□□ -1.94
CDH8P55286 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH8P55286 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH8P55286 OR4G2P-201ENST00000328113 903 ntBASIC2.94□□□□□ -1.94
CDH8P55286 SNORD3E-201ENST00000362899 217 ntBASIC2.94□□□□□ -1.94
CDH8P55286 RNU6-1179P-201ENST00000384667 107 ntBASIC2.94□□□□□ -1.94
CDH8P55286 RNU2-29P-201ENST00000410423 189 ntBASIC2.94□□□□□ -1.94
CDH8P55286 Y_RNA.623-201ENST00000411128 95 ntBASIC2.94□□□□□ -1.94
CDH8P55286 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH8P55286 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH8P55286 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH8P55286 AL513043.1-201ENST00000439124 535 ntBASIC2.94□□□□□ -1.94
CDH8P55286 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH8P55286 AL161651.1-201ENST00000440882 223 ntBASIC2.94□□□□□ -1.94
CDH8P55286 MTND1P1-201ENST00000445453 368 ntBASIC2.94□□□□□ -1.94
CDH8P55286 AL360271.2-201ENST00000447710 161 ntBASIC2.94□□□□□ -1.94
CDH8P55286 NDUFB1P2-201ENST00000449477 176 ntBASIC2.94□□□□□ -1.94
CDH8P55286 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH8P55286 AL118520.1-201ENST00000450770 291 ntBASIC2.94□□□□□ -1.94
CDH8P55286 AC233279.1-201ENST00000455300 423 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms