Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH4P55283 AC116347.2-201ENST00000514912 523 ntBASIC2.1□□□□□ -2.07
CDH4P55283 SNORA31.19-201ENST00000517079 126 ntBASIC2.1□□□□□ -2.07
CDH4P55283 AL354943.1-201ENST00000572103 781 ntBASIC2.1□□□□□ -2.07
CDH4P55283 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH4P55283 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDH4P55283 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH4P55283 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH4P55283 AC009090.3-201ENST00000616553 565 ntBASIC2.1□□□□□ -2.07
CDH4P55283 AC006338.1-201ENST00000618453 749 ntBASIC2.1□□□□□ -2.07
CDH4P55283 AC244517.12-201ENST00000623581 663 ntBASIC2.1□□□□□ -2.07
CDH4P55283 MTND5P42-201ENST00000637720 498 ntBASIC2.1□□□□□ -2.07
CDH4P55283 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDH4P55283 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDH4P55283 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.09□□□□□ -2.07
CDH4P55283 SMIM11P1-201ENST00000369586 178 ntBASIC2.09□□□□□ -2.07
CDH4P55283 RPS20P2-201ENST00000402520 389 ntBASIC2.09□□□□□ -2.07
CDH4P55283 AL139156.1-201ENST00000412785 841 ntBASIC2.09□□□□□ -2.07
CDH4P55283 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH4P55283 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
CDH4P55283 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.09□□□□□ -2.07
CDH4P55283 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.09□□□□□ -2.07
CDH4P55283 GPM6BP3-201ENST00000442797 145 ntBASIC2.09□□□□□ -2.07
CDH4P55283 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH4P55283 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH4P55283 AC093899.1-201ENST00000457984 376 ntBASIC2.09□□□□□ -2.07
CDH4P55283 AC140059.1-201ENST00000489238 361 ntBASIC2.09□□□□□ -2.07
CDH4P55283 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CDH4P55283 AC008526.1-201ENST00000509149 338 ntBASIC2.09□□□□□ -2.07
CDH4P55283 RNU6-677P-201ENST00000516914 101 ntBASIC2.09□□□□□ -2.07
CDH4P55283 RANP3-201ENST00000530970 276 ntBASIC2.09□□□□□ -2.07
CDH4P55283 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH4P55283 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH4P55283 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH4P55283 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH4P55283 AL355297.2-201ENST00000604792 129 ntBASIC2.09□□□□□ -2.07
CDH4P55283 AC130324.3-201ENST00000614165 542 ntBASIC2.09□□□□□ -2.07
CDH4P55283 uc_338.12-201ENST00000616344 181 ntBASIC2.09□□□□□ -2.07
CDH4P55283 AC009233.1-201ENST00000616477 371 ntBASIC2.09□□□□□ -2.07
CDH4P55283 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH4P55283 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH4P55283 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH4P55283 SNORD114-1-201ENST00000362705 72 ntBASIC2.08□□□□□ -2.08
CDH4P55283 RNY4P16-201ENST00000364768 94 ntBASIC2.08□□□□□ -2.08
CDH4P55283 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDH4P55283 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
CDH4P55283 MIR1261-201ENST00000408659 82 ntBASIC2.08□□□□□ -2.08
CDH4P55283 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH4P55283 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH4P55283 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH4P55283 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH4P55283 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH4P55283 AL139824.2-201ENST00000458731 1095 ntBASIC2.08□□□□□ -2.08
CDH4P55283 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH4P55283 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH4P55283 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH4P55283 AC118273.2-201ENST00000532092 465 ntBASIC2.08□□□□□ -2.08
CDH4P55283 CYCSP26-201ENST00000534107 320 ntBASIC2.08□□□□□ -2.08
CDH4P55283 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH4P55283 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH4P55283 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH4P55283 AC018714.1-201ENST00000605028 208 ntBASIC2.08□□□□□ -2.08
CDH4P55283 AC116312.1-201ENST00000606841 314 ntBASIC2.08□□□□□ -2.08
CDH4P55283 AC022893.3-201ENST00000607665 437 ntBASIC2.08□□□□□ -2.08
CDH4P55283 TUSC7.1-201ENST00000610969 165 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 AL365204.3-201ENST00000612448 685 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U4atac.1-201ENST00000618345 95 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 MIR5739-201ENST00000619803 80 ntBASIC2.08□□□□□ -2.08
CDH4P55283 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
CDH4P55283 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.08□□□□□ -2.08
CDH4P55283 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH4P55283 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CDH4P55283 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDH4P55283 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDH4P55283 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CDH4P55283 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.07□□□□□ -2.08
CDH4P55283 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CDH4P55283 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
CDH4P55283 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
CDH4P55283 RNU6-1025P-201ENST00000410629 104 ntBASIC2.07□□□□□ -2.08
CDH4P55283 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDH4P55283 AC006366.1-201ENST00000422002 759 ntBASIC2.07□□□□□ -2.08
CDH4P55283 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH4P55283 AC027124.2-201ENST00000428249 105 ntBASIC2.07□□□□□ -2.08
CDH4P55283 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH4P55283 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms