Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR578-201ENST00000384828 96 ntBASIC2.77□□□□□ -1.97
PDX1P52945 MIR181A1-201ENST00000385026 110 ntBASIC2.77□□□□□ -1.97
PDX1P52945 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PDX1P52945 AL360182.1-201ENST00000397433 468 ntBASIC2.77□□□□□ -1.97
PDX1P52945 MIR888-201ENST00000401186 77 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AL590002.1-201ENST00000406554 418 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.77□□□□□ -1.97
PDX1P52945 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.77□□□□□ -1.97
PDX1P52945 AC063976.3-201ENST00000426849 329 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.77□□□□□ -1.97
PDX1P52945 AL360271.2-201ENST00000447710 161 ntBASIC2.77□□□□□ -1.97
PDX1P52945 DPPA3P1-201ENST00000448050 469 ntBASIC2.77□□□□□ -1.97
PDX1P52945 MTND1P18-201ENST00000448191 573 ntBASIC2.77□□□□□ -1.97
PDX1P52945 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.77□□□□□ -1.97
PDX1P52945 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.77□□□□□ -1.97
PDX1P52945 RPL21P41-201ENST00000459863 264 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AC022493.1-201ENST00000492984 337 ntBASIC2.77□□□□□ -1.97
PDX1P52945 RPS27AP10-201ENST00000496103 208 ntBASIC2.77□□□□□ -1.97
PDX1P52945 EIF4EP3-201ENST00000498782 656 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.77□□□□□ -1.97
PDX1P52945 RNA5SP385-201ENST00000515947 110 ntBASIC2.77□□□□□ -1.97
PDX1P52945 SNORD59.2-201ENST00000516873 68 ntBASIC2.77□□□□□ -1.97
PDX1P52945 RNU6-835P-201ENST00000516974 104 ntBASIC2.77□□□□□ -1.97
PDX1P52945 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDX1P52945 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PDX1P52945 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.77□□□□□ -1.97
PDX1P52945 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDX1P52945 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.77□□□□□ -1.97
PDX1P52945 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.77□□□□□ -1.97
PDX1P52945 AC025165.5-201ENST00000602802 578 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AL035413.2-201ENST00000604801 525 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AC090517.2-201ENST00000614966 680 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AC024940.5-201ENST00000622889 474 ntBASIC2.77□□□□□ -1.97
PDX1P52945 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.77□□□□□ -1.97
PDX1P52945 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PDX1P52945 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.77□□□□□ -1.97
PDX1P52945 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.76□□□□□ -1.97
PDX1P52945 RNU6-1322P-201ENST00000364309 107 ntBASIC2.76□□□□□ -1.97
PDX1P52945 RNU6-483P-201ENST00000384088 108 ntBASIC2.76□□□□□ -1.97
PDX1P52945 RNU6-903P-201ENST00000391270 109 ntBASIC2.76□□□□□ -1.97
PDX1P52945 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PDX1P52945 RNU6-1025P-201ENST00000410629 104 ntBASIC2.76□□□□□ -1.97
PDX1P52945 USP9YP6-201ENST00000413550 854 ntBASIC2.76□□□□□ -1.97
PDX1P52945 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PDX1P52945 AL139413.1-201ENST00000421309 217 ntBASIC2.76□□□□□ -1.97
PDX1P52945 HMGN2P30-201ENST00000423237 256 ntBASIC2.76□□□□□ -1.97
PDX1P52945 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.76□□□□□ -1.97
PDX1P52945 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.76□□□□□ -1.97
PDX1P52945 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.76□□□□□ -1.97
PDX1P52945 NIPA2P5-201ENST00000452282 464 ntBASIC2.76□□□□□ -1.97
PDX1P52945 AC091179.1-201ENST00000461606 579 ntBASIC2.76□□□□□ -1.97
PDX1P52945 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.76□□□□□ -1.97
PDX1P52945 AP004217.1-201ENST00000480579 346 ntBASIC2.76□□□□□ -1.97
PDX1P52945 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.76□□□□□ -1.97
PDX1P52945 AC011352.1-201ENST00000512300 793 ntBASIC2.76□□□□□ -1.97
PDX1P52945 RNU6-143P-201ENST00000516942 93 ntBASIC2.76□□□□□ -1.97
PDX1P52945 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.76□□□□□ -1.97
PDX1P52945 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.76□□□□□ -1.97
PDX1P52945 AC107016.2-201ENST00000547968 190 ntBASIC2.76□□□□□ -1.97
PDX1P52945 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.76□□□□□ -1.97
PDX1P52945 AL133393.1-201ENST00000603277 287 ntBASIC2.76□□□□□ -1.97
PDX1P52945 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.76□□□□□ -1.97
PDX1P52945 AC008945.2-201ENST00000606056 604 ntBASIC2.76□□□□□ -1.97
PDX1P52945 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.76□□□□□ -1.97
PDX1P52945 IGHVIII-44-202ENST00000636235 289 ntBASIC2.76□□□□□ -1.97
PDX1P52945 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDX1P52945 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDX1P52945 MTND5P19-201ENST00000424872 1794 ntBASIC2.76□□□□□ -1.97
PDX1P52945 MAPK10-266ENST00000641066 6555 ntBASIC2.76□□□□□ -1.97
PDX1P52945 MTND4P35-201ENST00000604257 1375 ntBASIC2.75□□□□□ -1.97
PDX1P52945 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.75□□□□□ -1.97
PDX1P52945 ELF2P3-201ENST00000445099 1506 ntBASIC2.75□□□□□ -1.97
PDX1P52945 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDX1P52945 Y_RNA.33-201ENST00000362591 102 ntBASIC2.75□□□□□ -1.97
PDX1P52945 U3.12-201ENST00000364498 214 ntBASIC2.75□□□□□ -1.97
PDX1P52945 RNU4-12P-201ENST00000365233 139 ntBASIC2.75□□□□□ -1.97
PDX1P52945 SNORA69-201ENST00000383895 132 ntBASIC2.75□□□□□ -1.97
PDX1P52945 RNU1-73P-201ENST00000383971 164 ntBASIC2.75□□□□□ -1.97
PDX1P52945 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PDX1P52945 RNU1-101P-201ENST00000391171 127 ntBASIC2.75□□□□□ -1.97
PDX1P52945 RNU2-52P-201ENST00000410680 190 ntBASIC2.75□□□□□ -1.97
PDX1P52945 RN7SKP123-201ENST00000410732 291 ntBASIC2.75□□□□□ -1.97
PDX1P52945 RNU4-46P-201ENST00000410818 138 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.75□□□□□ -1.97
PDX1P52945 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.75□□□□□ -1.97
PDX1P52945 HSPE1P1-201ENST00000421494 318 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.75□□□□□ -1.97
PDX1P52945 TIMM9P3-201ENST00000428659 274 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.75□□□□□ -1.97
PDX1P52945 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.75□□□□□ -1.97
PDX1P52945 RPL26P9-201ENST00000457466 433 ntBASIC2.75□□□□□ -1.97
PDX1P52945 SNORD109B-201ENST00000458961 67 ntBASIC2.75□□□□□ -1.97
PDX1P52945 SNORD109A-201ENST00000459128 67 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AL121769.1-201ENST00000469473 401 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AL163973.1-201ENST00000484753 577 ntBASIC2.75□□□□□ -1.97
PDX1P52945 RPL36AP51-201ENST00000487216 318 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.75□□□□□ -1.97
PDX1P52945 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.75□□□□□ -1.97
PDX1P52945 AC112206.3-201ENST00000514578 389 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC105417.1-201ENST00000514691 285 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms