Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC002550.2-201ENST00000621246 394 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
GTF2A1P52655 RNA5SP327-201ENST00000362494 101 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
GTF2A1P52655 SNORD14D-201ENST00000384390 87 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 MIR217-201ENST00000384817 110 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.91□□□□□ -2.26
GTF2A1P52655 AL133475.1-201ENST00000404414 305 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 MTATP6P27-201ENST00000416987 621 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AC007435.1-201ENST00000421086 415 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.91□□□□□ -2.26
GTF2A1P52655 AC010153.1-201ENST00000432862 727 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.91□□□□□ -2.26
GTF2A1P52655 MTND1P28-201ENST00000435623 950 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AC234064.1-201ENST00000436312 247 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 RPS15AP9-201ENST00000439856 381 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 GDI2P2-201ENST00000445131 608 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.91□□□□□ -2.26
GTF2A1P52655 RPS23P4-201ENST00000487908 423 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AC103851.1-201ENST00000506833 274 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.91□□□□□ -2.26
GTF2A1P52655 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.91□□□□□ -2.26
GTF2A1P52655 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
GTF2A1P52655 AP006587.4-201ENST00000526053 529 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.91□□□□□ -2.26
GTF2A1P52655 MIR3945-201ENST00000581853 98 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.91□□□□□ -2.26
GTF2A1P52655 AC004492.1-201ENST00000607036 742 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AC092140.2-201ENST00000618027 521 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 AL353770.2-201ENST00000620024 78 ntBASIC0.91□□□□□ -2.26
GTF2A1P52655 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.91□□□□□ -2.26
GTF2A1P52655 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
GTF2A1P52655 HSBP1P2-201ENST00000299671 229 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 RNU1-58P-201ENST00000362413 163 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 RNU6-26P-201ENST00000383985 107 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 RNU6-575P-201ENST00000411326 105 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 RPL21P90-201ENST00000415692 466 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 VN1R42P-201ENST00000424651 344 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 AC245047.4-201ENST00000433189 144 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 AC007000.2-201ENST00000442564 487 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 AC010095.1-201ENST00000443543 144 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.9□□□□□ -2.27
GTF2A1P52655 PRELID3BP1-201ENST00000457142 540 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 RPL9P9-202ENST00000466501 579 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.9□□□□□ -2.27
GTF2A1P52655 AC091860.1-201ENST00000505723 432 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 AC010460.2-201ENST00000509054 677 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.9□□□□□ -2.27
GTF2A1P52655 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.9□□□□□ -2.27
GTF2A1P52655 LINC00557-201ENST00000563184 1279 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.9□□□□□ -2.27
GTF2A1P52655 AC087045.1-201ENST00000605856 382 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 MIR8063-201ENST00000621930 81 ntBASIC0.9□□□□□ -2.27
GTF2A1P52655 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
GTF2A1P52655 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.89□□□□□ -2.27
GTF2A1P52655 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.89□□□□□ -2.27
GTF2A1P52655 RNU6-1164P-201ENST00000364428 107 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 RNU2-68P-201ENST00000410878 191 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 TPMTP3-201ENST00000411928 735 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 AC013410.2-201ENST00000422627 201 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 CR848007.2-201ENST00000424918 787 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 RPS27P16-201ENST00000425758 201 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 MTND4LP14-201ENST00000429447 288 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 UBE2V2P3-201ENST00000433562 437 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 COX6CP18-201ENST00000448769 222 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 AC009474.2-201ENST00000451383 136 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 GTF2IP12-201ENST00000456547 356 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 RNVU1-2-201ENST00000516326 135 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 SNORA31.17-201ENST00000516953 127 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 RNA5SP404-201ENST00000517118 132 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.89□□□□□ -2.27
GTF2A1P52655 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.89□□□□□ -2.27
GTF2A1P52655 AC010133.1-201ENST00000615809 842 ntBASIC0.89□□□□□ -2.27
GTF2A1P52655 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
GTF2A1P52655 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
GTF2A1P52655 RNU6-492P-201ENST00000363035 104 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 RNU1-22P-201ENST00000363334 158 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 SNORA48.1-201ENST00000390879 135 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AL590623.1-201ENST00000427864 105 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.88□□□□□ -2.27
GTF2A1P52655 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.88□□□□□ -2.27
GTF2A1P52655 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.88□□□□□ -2.27
GTF2A1P52655 RNU7-140P-201ENST00000459546 60 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.88□□□□□ -2.27
GTF2A1P52655 RNU6-678P-201ENST00000516832 109 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 RNU6-586P-201ENST00000517265 104 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.88□□□□□ -2.27
GTF2A1P52655 COPS8P3-201ENST00000526024 482 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.88□□□□□ -2.27
GTF2A1P52655 AP000763.2-201ENST00000540641 163 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.88□□□□□ -2.27
GTF2A1P52655 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.88□□□□□ -2.27
GTF2A1P52655 AC098826.3-201ENST00000603823 466 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AL355598.1-201ENST00000604169 202 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.88□□□□□ -2.27
GTF2A1P52655 AC097468.3-201ENST00000607956 456 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms