Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP11P51784 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.62□□□□□ -1.67
USP11P51784 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP11P51784 MTND5P9-201ENST00000503854 1755 ntBASIC4.61□□□□□ -1.67
USP11P51784 AC007685.1-201ENST00000329806 452 ntBASIC4.61□□□□□ -1.67
USP11P51784 SNORD74.4-201ENST00000364129 80 ntBASIC4.61□□□□□ -1.67
USP11P51784 RNU6-1140P-201ENST00000410517 106 ntBASIC4.61□□□□□ -1.67
USP11P51784 Y_RNA.793-201ENST00000411222 111 ntBASIC4.61□□□□□ -1.67
USP11P51784 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.61□□□□□ -1.67
USP11P51784 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.61□□□□□ -1.67
USP11P51784 HIGD1AP2-201ENST00000446367 280 ntBASIC4.61□□□□□ -1.67
USP11P51784 AL590399.6-201ENST00000446396 307 ntBASIC4.61□□□□□ -1.67
USP11P51784 RPS23P5-201ENST00000495419 428 ntBASIC4.61□□□□□ -1.67
USP11P51784 AL359273.1-201ENST00000510918 627 ntBASIC4.61□□□□□ -1.67
USP11P51784 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.61□□□□□ -1.67
USP11P51784 AC026402.1-201ENST00000513642 170 ntBASIC4.61□□□□□ -1.67
USP11P51784 Y_RNA.683-201ENST00000516508 93 ntBASIC4.61□□□□□ -1.67
USP11P51784 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.61□□□□□ -1.67
USP11P51784 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.61□□□□□ -1.67
USP11P51784 AL139395.1-201ENST00000603662 160 ntBASIC4.61□□□□□ -1.67
USP11P51784 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.61□□□□□ -1.67
USP11P51784 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USP11P51784 MARK2P15-201ENST00000432204 2186 ntBASIC4.61□□□□□ -1.67
USP11P51784 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP11P51784 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USP11P51784 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP11P51784 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP11P51784 SNORD50.1-201ENST00000362987 71 ntBASIC4.6□□□□□ -1.67
USP11P51784 Y_RNA.83-201ENST00000363005 113 ntBASIC4.6□□□□□ -1.67
USP11P51784 SNORD81.1-201ENST00000363064 77 ntBASIC4.6□□□□□ -1.67
USP11P51784 RNA5SP515-201ENST00000364570 118 ntBASIC4.6□□□□□ -1.67
USP11P51784 Y_RNA.541-201ENST00000384640 113 ntBASIC4.6□□□□□ -1.67
USP11P51784 MIR521-1-201ENST00000384902 87 ntBASIC4.6□□□□□ -1.67
USP11P51784 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.6□□□□□ -1.67
USP11P51784 RNU6-712P-201ENST00000410558 100 ntBASIC4.6□□□□□ -1.67
USP11P51784 RPL7AP73-201ENST00000413490 353 ntBASIC4.6□□□□□ -1.67
USP11P51784 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP11P51784 AL592045.1-201ENST00000429867 352 ntBASIC4.6□□□□□ -1.67
USP11P51784 HMGB1P27-201ENST00000431429 603 ntBASIC4.6□□□□□ -1.67
USP11P51784 RPL29P29-201ENST00000448725 423 ntBASIC4.6□□□□□ -1.67
USP11P51784 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP11P51784 AL132838.2-201ENST00000492041 314 ntBASIC4.6□□□□□ -1.67
USP11P51784 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.6□□□□□ -1.67
USP11P51784 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.6□□□□□ -1.67
USP11P51784 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.6□□□□□ -1.67
USP11P51784 TRAV37-201ENST00000553906 342 ntBASIC4.6□□□□□ -1.67
USP11P51784 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.6□□□□□ -1.67
USP11P51784 MIR1254-2-201ENST00000579553 63 ntBASIC4.6□□□□□ -1.67
USP11P51784 MIR6868-201ENST00000611215 58 ntBASIC4.6□□□□□ -1.67
USP11P51784 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.6□□□□□ -1.67
USP11P51784 MIR376A1-201ENST00000616574 68 ntBASIC4.6□□□□□ -1.67
USP11P51784 ZYXP1-201ENST00000617638 118 ntBASIC4.6□□□□□ -1.67
USP11P51784 Z99571.1-201ENST00000636677 394 ntBASIC4.6□□□□□ -1.67
USP11P51784 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USP11P51784 AC022893.2-201ENST00000564832 3296 ntBASIC4.6□□□□□ -1.67
USP11P51784 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USP11P51784 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
USP11P51784 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
USP11P51784 SPRR2C-201ENST00000290702 219 ntBASIC4.59□□□□□ -1.67
USP11P51784 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
USP11P51784 SNORD35B-201ENST00000363660 87 ntBASIC4.59□□□□□ -1.67
USP11P51784 RNA5SP240-201ENST00000365355 128 ntBASIC4.59□□□□□ -1.67
USP11P51784 RNU6-76P-201ENST00000384060 104 ntBASIC4.59□□□□□ -1.67
USP11P51784 RNU6-378P-201ENST00000384324 107 ntBASIC4.59□□□□□ -1.67
USP11P51784 RPS29P13-201ENST00000402041 169 ntBASIC4.59□□□□□ -1.67
USP11P51784 AL096701.2-201ENST00000416920 238 ntBASIC4.59□□□□□ -1.67
USP11P51784 CYP4F29P-201ENST00000420685 446 ntBASIC4.59□□□□□ -1.67
USP11P51784 MTCO3P29-201ENST00000432119 779 ntBASIC4.59□□□□□ -1.67
USP11P51784 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.59□□□□□ -1.67
USP11P51784 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
USP11P51784 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.59□□□□□ -1.67
USP11P51784 AL513124.1-201ENST00000450410 614 ntBASIC4.59□□□□□ -1.67
USP11P51784 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.59□□□□□ -1.67
USP11P51784 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.59□□□□□ -1.67
USP11P51784 RNU7-120P-201ENST00000459334 63 ntBASIC4.59□□□□□ -1.67
USP11P51784 RPL7P49-201ENST00000471402 708 ntBASIC4.59□□□□□ -1.67
USP11P51784 RPL30P10-201ENST00000488148 337 ntBASIC4.59□□□□□ -1.67
USP11P51784 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.59□□□□□ -1.67
USP11P51784 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.59□□□□□ -1.67
USP11P51784 APOOP4-201ENST00000513530 597 ntBASIC4.59□□□□□ -1.67
USP11P51784 IGKV2-38-201ENST00000517443 247 ntBASIC4.59□□□□□ -1.67
USP11P51784 AC022868.1-201ENST00000517767 391 ntBASIC4.59□□□□□ -1.67
USP11P51784 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.59□□□□□ -1.67
USP11P51784 AC022968.1-201ENST00000567372 442 ntBASIC4.59□□□□□ -1.67
USP11P51784 AC098826.3-201ENST00000603823 466 ntBASIC4.59□□□□□ -1.67
USP11P51784 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.59□□□□□ -1.67
USP11P51784 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.59□□□□□ -1.67
USP11P51784 U6.92-201ENST00000636464 89 ntBASIC4.59□□□□□ -1.67
USP11P51784 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USP11P51784 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.59□□□□□ -1.67
USP11P51784 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
USP11P51784 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
USP11P51784 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
USP11P51784 AP001148.1-201ENST00000624124 2359 ntBASIC4.58□□□□□ -1.68
USP11P51784 RNU6-1249P-201ENST00000363237 111 ntBASIC4.58□□□□□ -1.68
USP11P51784 RNU6-384P-201ENST00000364900 104 ntBASIC4.58□□□□□ -1.68
USP11P51784 RNU6-356P-201ENST00000384140 107 ntBASIC4.58□□□□□ -1.68
USP11P51784 RNU6-48P-201ENST00000384161 107 ntBASIC4.58□□□□□ -1.68
USP11P51784 PPIAP31-201ENST00000405422 495 ntBASIC4.58□□□□□ -1.68
USP11P51784 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms