Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.97□□□□□ -1.77
GDNFP39905 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.97□□□□□ -1.77
GDNFP39905 AL592437.2-201ENST00000421655 2434 ntBASIC3.96□□□□□ -1.77
GDNFP39905 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
GDNFP39905 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
GDNFP39905 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.96□□□□□ -1.78
GDNFP39905 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.96□□□□□ -1.78
GDNFP39905 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
GDNFP39905 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
GDNFP39905 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.96□□□□□ -1.78
GDNFP39905 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GDNFP39905 RNA5SP361-201ENST00000362686 118 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.82-201ENST00000363000 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.92-201ENST00000363043 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.235-201ENST00000364412 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.306-201ENST00000365015 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.308-201ENST00000365043 101 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.312-201ENST00000365089 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.322-201ENST00000365151 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RNU6-514P-201ENST00000384208 107 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RNU6-22P-201ENST00000384355 107 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RNU6-166P-201ENST00000384371 107 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RNU6-1289P-201ENST00000384431 106 ntBASIC3.96□□□□□ -1.78
GDNFP39905 SNORA11B-201ENST00000408175 129 ntBASIC3.96□□□□□ -1.78
GDNFP39905 SNORD12B-201ENST00000410433 91 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RPL23AP36-201ENST00000413895 458 ntBASIC3.96□□□□□ -1.78
GDNFP39905 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.96□□□□□ -1.78
GDNFP39905 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.96□□□□□ -1.78
GDNFP39905 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.96□□□□□ -1.78
GDNFP39905 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.650-201ENST00000459002 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 AC073901.1-201ENST00000462471 408 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RN7SL329P-201ENST00000467740 299 ntBASIC3.96□□□□□ -1.78
GDNFP39905 AC091959.1-201ENST00000495857 238 ntBASIC3.96□□□□□ -1.78
GDNFP39905 SNORD116-26-201ENST00000516006 96 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.777-201ENST00000516982 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.96□□□□□ -1.78
GDNFP39905 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.96□□□□□ -1.78
GDNFP39905 AL161713.1-201ENST00000555538 145 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RPL21P9-201ENST00000556149 474 ntBASIC3.96□□□□□ -1.78
GDNFP39905 CYP4A43P-201ENST00000568156 121 ntBASIC3.96□□□□□ -1.78
GDNFP39905 FAM60BP-201ENST00000578364 658 ntBASIC3.96□□□□□ -1.78
GDNFP39905 SNORD84-203ENST00000584275 78 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.771-201ENST00000598668 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RPL23AP88-201ENST00000605759 454 ntBASIC3.96□□□□□ -1.78
GDNFP39905 Y_RNA.789-201ENST00000622480 102 ntBASIC3.96□□□□□ -1.78
GDNFP39905 AC091905.2-201ENST00000623143 306 ntBASIC3.96□□□□□ -1.78
GDNFP39905 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GDNFP39905 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.96□□□□□ -1.78
GDNFP39905 AC011266.1-201ENST00000624119 3569 ntBASIC3.96□□□□□ -1.78
GDNFP39905 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GDNFP39905 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GDNFP39905 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
GDNFP39905 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GDNFP39905 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GDNFP39905 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GDNFP39905 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GDNFP39905 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
GDNFP39905 RNU6-968P-201ENST00000384076 107 ntBASIC3.95□□□□□ -1.78
GDNFP39905 MIR32-201ENST00000384965 70 ntBASIC3.95□□□□□ -1.78
GDNFP39905 UBA52P6-201ENST00000399822 382 ntBASIC3.95□□□□□ -1.78
GDNFP39905 Z85995.1-201ENST00000415547 335 ntBASIC3.95□□□□□ -1.78
GDNFP39905 AP000907.1-201ENST00000428428 510 ntBASIC3.95□□□□□ -1.78
GDNFP39905 MTCO1P5-201ENST00000433573 344 ntBASIC3.95□□□□□ -1.78
GDNFP39905 SETP5-201ENST00000437270 562 ntBASIC3.95□□□□□ -1.78
GDNFP39905 AL353705.4-201ENST00000449661 238 ntBASIC3.95□□□□□ -1.78
GDNFP39905 AURKAPS2-201ENST00000454983 333 ntBASIC3.95□□□□□ -1.78
GDNFP39905 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.95□□□□□ -1.78
GDNFP39905 AP000870.1-201ENST00000472927 406 ntBASIC3.95□□□□□ -1.78
GDNFP39905 AL160314.1-201ENST00000490836 438 ntBASIC3.95□□□□□ -1.78
GDNFP39905 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
GDNFP39905 RNU6-572P-201ENST00000516724 80 ntBASIC3.95□□□□□ -1.78
GDNFP39905 RNA5SP290-201ENST00000517133 127 ntBASIC3.95□□□□□ -1.78
GDNFP39905 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.95□□□□□ -1.78
GDNFP39905 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.95□□□□□ -1.78
GDNFP39905 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.95□□□□□ -1.78
GDNFP39905 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.95□□□□□ -1.78
GDNFP39905 MIR4308-201ENST00000580634 81 ntBASIC3.95□□□□□ -1.78
GDNFP39905 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.95□□□□□ -1.78
GDNFP39905 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.95□□□□□ -1.78
GDNFP39905 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
GDNFP39905 SCARNA4-201ENST00000629045 128 ntBASIC3.95□□□□□ -1.78
GDNFP39905 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
GDNFP39905 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
GDNFP39905 RBBP8P1-201ENST00000449447 1844 ntBASIC3.95□□□□□ -1.78
GDNFP39905 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.95□□□□□ -1.78
GDNFP39905 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GDNFP39905 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GDNFP39905 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.95□□□□□ -1.78
GDNFP39905 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
GDNFP39905 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.95□□□□□ -1.78
GDNFP39905 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GDNFP39905 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
GDNFP39905 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GDNFP39905 RNU1-15P-201ENST00000353977 144 ntBASIC3.94□□□□□ -1.78
GDNFP39905 UBE2WP1-201ENST00000362030 340 ntBASIC3.94□□□□□ -1.78
GDNFP39905 RNU6-78P-201ENST00000362897 107 ntBASIC3.94□□□□□ -1.78
GDNFP39905 RNU6-173P-201ENST00000364215 104 ntBASIC3.94□□□□□ -1.78
GDNFP39905 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
GDNFP39905 RNU1-82P-201ENST00000390851 165 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms