Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.63□□□□□ -1.83
COL15A1P39059 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.63□□□□□ -1.83
COL15A1P39059 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.63□□□□□ -1.83
COL15A1P39059 AC046134.1-201ENST00000514454 666 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 SCARNA15.2-201ENST00000516409 127 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 RNU6-1256P-201ENST00000516539 103 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.63□□□□□ -1.83
COL15A1P39059 AC091544.4-201ENST00000555268 342 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 AL138976.2-201ENST00000563989 694 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.63□□□□□ -1.83
COL15A1P39059 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.63□□□□□ -1.83
COL15A1P39059 AC093913.1-201ENST00000614178 329 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 uc_338.34-201ENST00000617467 174 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
COL15A1P39059 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.62□□□□□ -1.83
COL15A1P39059 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
COL15A1P39059 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 AL139276.1-201ENST00000311910 1001 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 Y_RNA.231-201ENST00000364358 102 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 RNU6-14P-201ENST00000384630 106 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 AC012498.1-201ENST00000424037 437 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.62□□□□□ -1.83
COL15A1P39059 ERLEC1P1-201ENST00000433806 578 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 AL049830.2-201ENST00000480072 201 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.62□□□□□ -1.83
COL15A1P39059 RNU6-927P-201ENST00000516199 100 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 SNORA70.16-201ENST00000516390 95 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.62□□□□□ -1.83
COL15A1P39059 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.62□□□□□ -1.83
COL15A1P39059 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.62□□□□□ -1.83
COL15A1P39059 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.62□□□□□ -1.83
COL15A1P39059 AC018638.8-201ENST00000588755 281 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 AC022893.3-201ENST00000607665 437 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 AL390240.1-201ENST00000612950 384 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 AC022306.2-201ENST00000617563 647 ntBASIC3.62□□□□□ -1.83
COL15A1P39059 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL15A1P39059 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
COL15A1P39059 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL15A1P39059 AC103710.2-202ENST00000641454 2853 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.61□□□□□ -1.83
COL15A1P39059 Y_RNA.72-201ENST00000362894 103 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL15A1P39059 MIR9-1-201ENST00000385198 89 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 RPL21P3-201ENST00000395517 478 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AL162578.1-201ENST00000406202 378 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 RNU4-26P-201ENST00000410270 107 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 RPS12P24-201ENST00000412619 387 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AC080125.1-201ENST00000414888 684 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.61□□□□□ -1.83
COL15A1P39059 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.61□□□□□ -1.83
COL15A1P39059 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.61□□□□□ -1.83
COL15A1P39059 PMCHL2-203ENST00000457791 237 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AC146507.2-201ENST00000460608 476 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 RPL23AP11-201ENST00000475260 469 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AC091885.1-201ENST00000506658 268 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AC098591.2-201ENST00000510152 315 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL15A1P39059 SNORA31.3-201ENST00000516029 96 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 Y_RNA.676-201ENST00000516393 96 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 RNU6-685P-201ENST00000517088 95 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.61□□□□□ -1.83
COL15A1P39059 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.61□□□□□ -1.83
COL15A1P39059 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.61□□□□□ -1.83
COL15A1P39059 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
COL15A1P39059 AC025253.1-201ENST00000613623 543 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AC034102.8-201ENST00000615146 484 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 Y_RNA.804-201ENST00000615262 101 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 AC243829.7-201ENST00000633081 225 ntBASIC3.61□□□□□ -1.83
COL15A1P39059 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
COL15A1P39059 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.6□□□□□ -1.83
COL15A1P39059 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL15A1P39059 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.6□□□□□ -1.83
COL15A1P39059 UBE2L2-201ENST00000254302 429 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 CBX3P1-201ENST00000325243 554 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 RNU1-112P-201ENST00000364401 164 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 SNORA32.2-201ENST00000384049 122 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 MIR196B-201ENST00000384852 84 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.6□□□□□ -1.83
COL15A1P39059 USP9YP8-201ENST00000441913 500 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 AC104058.1-201ENST00000448028 297 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 RPS3P1-201ENST00000456781 192 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 RNU7-180P-201ENST00000459240 63 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 RPS27P29-201ENST00000463110 252 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 RPL39P36-201ENST00000490784 156 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 AC008549.1-201ENST00000512900 643 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 RNU6-143P-201ENST00000516942 93 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 AL137161.1-201ENST00000532231 390 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms