Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SNORA31.17-201ENST00000516953 127 ntBASIC0.53□□□□□ -2.32
SNCAP37840 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.53□□□□□ -2.32
SNCAP37840 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.53□□□□□ -2.32
SNCAP37840 AC079598.5-201ENST00000547460 117 ntBASIC0.53□□□□□ -2.32
SNCAP37840 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.53□□□□□ -2.32
SNCAP37840 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.53□□□□□ -2.32
SNCAP37840 AC024257.5-201ENST00000612739 531 ntBASIC0.53□□□□□ -2.32
SNCAP37840 MTCO1P23-201ENST00000415223 1526 ntBASIC0.53□□□□□ -2.33
SNCAP37840 SNORD14D-201ENST00000384390 87 ntBASIC0.52□□□□□ -2.33
SNCAP37840 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
SNCAP37840 RNU2-64P-201ENST00000411315 191 ntBASIC0.52□□□□□ -2.33
SNCAP37840 AL353621.1-201ENST00000418219 243 ntBASIC0.52□□□□□ -2.33
SNCAP37840 PPP1R11P2-201ENST00000423543 382 ntBASIC0.52□□□□□ -2.33
SNCAP37840 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.52□□□□□ -2.33
SNCAP37840 RPS20P20-201ENST00000460498 340 ntBASIC0.52□□□□□ -2.33
SNCAP37840 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SNCAP37840 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.52□□□□□ -2.33
SNCAP37840 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.52□□□□□ -2.33
SNCAP37840 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.52□□□□□ -2.33
SNCAP37840 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.52□□□□□ -2.33
SNCAP37840 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.52□□□□□ -2.33
SNCAP37840 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SNCAP37840 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.52□□□□□ -2.33
SNCAP37840 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.52□□□□□ -2.33
SNCAP37840 AC021171.1-201ENST00000603137 706 ntBASIC0.52□□□□□ -2.33
SNCAP37840 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.52□□□□□ -2.33
SNCAP37840 AC004067.1-201ENST00000608733 700 ntBASIC0.52□□□□□ -2.33
SNCAP37840 AL021879.1-201ENST00000611756 288 ntBASIC0.52□□□□□ -2.33
SNCAP37840 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
SNCAP37840 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.52□□□□□ -2.33
SNCAP37840 AC018630.2-201ENST00000534866 2403 ntBASIC0.52□□□□□ -2.33
SNCAP37840 SNORD33-201ENST00000362761 85 ntBASIC0.51□□□□□ -2.33
SNCAP37840 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
SNCAP37840 PTGES3P1-201ENST00000439531 483 ntBASIC0.51□□□□□ -2.33
SNCAP37840 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.51□□□□□ -2.33
SNCAP37840 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.51□□□□□ -2.33
SNCAP37840 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.51□□□□□ -2.33
SNCAP37840 DUXAP8-207ENST00000456786 622 ntBASIC0.51□□□□□ -2.33
SNCAP37840 AC145146.1-201ENST00000496370 254 ntBASIC0.51□□□□□ -2.33
SNCAP37840 AC005840.1-201ENST00000498412 377 ntBASIC0.51□□□□□ -2.33
SNCAP37840 AC008837.2-201ENST00000513076 418 ntBASIC0.51□□□□□ -2.33
SNCAP37840 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.51□□□□□ -2.33
SNCAP37840 MIR3167-201ENST00000579623 85 ntBASIC0.51□□□□□ -2.33
SNCAP37840 MIR4769-201ENST00000584126 77 ntBASIC0.51□□□□□ -2.33
SNCAP37840 DDX43P2-201ENST00000604753 1354 ntBASIC0.51□□□□□ -2.33
SNCAP37840 AC069304.2-201ENST00000605154 435 ntBASIC0.51□□□□□ -2.33
SNCAP37840 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
SNCAP37840 AC233981.2-201ENST00000611524 1614 ntBASIC0.5□□□□□ -2.33
SNCAP37840 MIR1267-201ENST00000408723 78 ntBASIC0.5□□□□□ -2.33
SNCAP37840 USP9YP33-201ENST00000412220 421 ntBASIC0.5□□□□□ -2.33
SNCAP37840 RPL26P27-201ENST00000414397 437 ntBASIC0.5□□□□□ -2.33
SNCAP37840 PTGES3P4-201ENST00000426243 356 ntBASIC0.5□□□□□ -2.33
SNCAP37840 MEMO1P3-201ENST00000459811 302 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AC087477.1-201ENST00000465747 340 ntBASIC0.5□□□□□ -2.33
SNCAP37840 RPL36AP48-201ENST00000485521 314 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AC010409.1-201ENST00000487382 476 ntBASIC0.5□□□□□ -2.33
SNCAP37840 COX7A2P2-201ENST00000505291 250 ntBASIC0.5□□□□□ -2.33
SNCAP37840 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.5□□□□□ -2.33
SNCAP37840 AC108078.1-201ENST00000508073 725 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.5□□□□□ -2.33
SNCAP37840 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.5□□□□□ -2.33
SNCAP37840 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.5□□□□□ -2.33
SNCAP37840 MIR4498-201ENST00000577599 66 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AP001004.1-201ENST00000582468 324 ntBASIC0.5□□□□□ -2.33
SNCAP37840 VN1R88P-201ENST00000596787 292 ntBASIC0.5□□□□□ -2.33
SNCAP37840 BBIP1P1-201ENST00000602999 279 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AL391646.1-201ENST00000603860 190 ntBASIC0.5□□□□□ -2.33
SNCAP37840 NDUFA8P1-201ENST00000605525 367 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AC084824.5-201ENST00000612009 413 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AC011939.3-201ENST00000613686 466 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.5□□□□□ -2.33
SNCAP37840 AL109620.1-201ENST00000618738 1197 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AC073569.3-201ENST00000619055 682 ntBASIC0.5□□□□□ -2.33
SNCAP37840 AC104820.1-201ENST00000624183 307 ntBASIC0.5□□□□□ -2.33
SNCAP37840 MTND4P16-201ENST00000466108 1367 ntBASIC0.49□□□□□ -2.33
SNCAP37840 MIR508-201ENST00000384857 115 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AP000275.1-201ENST00000411943 390 ntBASIC0.49□□□□□ -2.33
SNCAP37840 EIF1P1-201ENST00000421436 341 ntBASIC0.49□□□□□ -2.33
SNCAP37840 FAM204CP-201ENST00000424489 642 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AL353706.1-201ENST00000436728 494 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.49□□□□□ -2.33
SNCAP37840 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SNCAP37840 AL353691.1-201ENST00000451332 387 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.49□□□□□ -2.33
SNCAP37840 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.49□□□□□ -2.33
SNCAP37840 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SNCAP37840 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.49□□□□□ -2.33
SNCAP37840 CYP3A52P-201ENST00000563326 91 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AC133485.1-201ENST00000567176 124 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AC138907.6-201ENST00000568401 126 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.49□□□□□ -2.33
SNCAP37840 MTCO2P2-201ENST00000591258 225 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AL022345.1-201ENST00000607292 135 ntBASIC0.49□□□□□ -2.33
SNCAP37840 AC013476.2-201ENST00000614456 459 ntBASIC0.49□□□□□ -2.33
SNCAP37840 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.49□□□□□ -2.33
SNCAP37840 AC099654.5-201ENST00000636479 350 ntBASIC0.49□□□□□ -2.33
SNCAP37840 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SNCAP37840 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.48□□□□□ -2.33
SNCAP37840 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SNCAP37840 MIR373-201ENST00000362273 69 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms