Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 NDUFA8P1-201ENST00000605525 367 ntBASIC1.61□□□□□ -2.15
RPA3P35244 AL121895.2-201ENST00000619558 447 ntBASIC1.61□□□□□ -2.15
RPA3P35244 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.61□□□□□ -2.15
RPA3P35244 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.61□□□□□ -2.15
RPA3P35244 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.61□□□□□ -2.15
RPA3P35244 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPA3P35244 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
RPA3P35244 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPA3P35244 MTND4P23-201ENST00000447723 1363 ntBASIC1.6□□□□□ -2.15
RPA3P35244 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RPA3P35244 RNU1-23P-201ENST00000363361 144 ntBASIC1.6□□□□□ -2.15
RPA3P35244 RNU6-701P-201ENST00000384059 107 ntBASIC1.6□□□□□ -2.15
RPA3P35244 RNU6-1032P-201ENST00000384100 107 ntBASIC1.6□□□□□ -2.15
RPA3P35244 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RPA3P35244 RN7SKP101-201ENST00000411376 320 ntBASIC1.6□□□□□ -2.15
RPA3P35244 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.6□□□□□ -2.15
RPA3P35244 AL117351.1-201ENST00000438864 766 ntBASIC1.6□□□□□ -2.15
RPA3P35244 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.6□□□□□ -2.15
RPA3P35244 BRK1P2-201ENST00000442875 223 ntBASIC1.6□□□□□ -2.15
RPA3P35244 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RPA3P35244 AC023194.1-201ENST00000493084 308 ntBASIC1.6□□□□□ -2.15
RPA3P35244 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.6□□□□□ -2.15
RPA3P35244 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RPA3P35244 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
RPA3P35244 AC109445.1-201ENST00000512356 383 ntBASIC1.6□□□□□ -2.15
RPA3P35244 AC009902.1-201ENST00000519351 183 ntBASIC1.6□□□□□ -2.15
RPA3P35244 AP005435.4-201ENST00000529514 284 ntBASIC1.6□□□□□ -2.15
RPA3P35244 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.6□□□□□ -2.15
RPA3P35244 DUXAP1-201ENST00000556632 463 ntBASIC1.6□□□□□ -2.15
RPA3P35244 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RPA3P35244 MIR4782-201ENST00000577987 79 ntBASIC1.6□□□□□ -2.15
RPA3P35244 AC090970.3-201ENST00000612566 866 ntBASIC1.6□□□□□ -2.15
RPA3P35244 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RPA3P35244 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.6□□□□□ -2.15
RPA3P35244 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RPA3P35244 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
RPA3P35244 ZNF876P-202ENST00000398732 1485 ntBASIC1.59□□□□□ -2.15
RPA3P35244 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RPA3P35244 MIR518A2-201ENST00000384966 87 ntBASIC1.59□□□□□ -2.15
RPA3P35244 MIR561-201ENST00000385216 97 ntBASIC1.59□□□□□ -2.15
RPA3P35244 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.59□□□□□ -2.15
RPA3P35244 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA3P35244 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA3P35244 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA3P35244 AL445669.1-201ENST00000426743 755 ntBASIC1.59□□□□□ -2.15
RPA3P35244 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.59□□□□□ -2.15
RPA3P35244 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.59□□□□□ -2.15
RPA3P35244 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.59□□□□□ -2.15
RPA3P35244 AC007327.1-201ENST00000447461 264 ntBASIC1.59□□□□□ -2.15
RPA3P35244 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA3P35244 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA3P35244 AC117503.1-201ENST00000472241 394 ntBASIC1.59□□□□□ -2.15
RPA3P35244 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.59□□□□□ -2.15
RPA3P35244 AC055855.1-201ENST00000489563 579 ntBASIC1.59□□□□□ -2.15
RPA3P35244 HMGB3P17-201ENST00000504195 649 ntBASIC1.59□□□□□ -2.15
RPA3P35244 RNU6-276P-201ENST00000516114 96 ntBASIC1.59□□□□□ -2.15
RPA3P35244 RNU6-572P-201ENST00000516724 80 ntBASIC1.59□□□□□ -2.15
RPA3P35244 SNORA48.11-201ENST00000517015 89 ntBASIC1.59□□□□□ -2.15
RPA3P35244 AC034114.1-201ENST00000520293 285 ntBASIC1.59□□□□□ -2.15
RPA3P35244 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA3P35244 AP005639.2-201ENST00000527592 928 ntBASIC1.59□□□□□ -2.15
RPA3P35244 OR5AL2P-201ENST00000532185 920 ntBASIC1.59□□□□□ -2.15
RPA3P35244 AC005034.5-201ENST00000604219 466 ntBASIC1.59□□□□□ -2.15
RPA3P35244 AC092953.2-201ENST00000608000 699 ntBASIC1.59□□□□□ -2.15
RPA3P35244 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.59□□□□□ -2.15
RPA3P35244 uc_338.5-201ENST00000611839 155 ntBASIC1.59□□□□□ -2.15
RPA3P35244 PART1_2.1-201ENST00000612397 250 ntBASIC1.59□□□□□ -2.15
RPA3P35244 AL773524.1-201ENST00000614065 229 ntBASIC1.59□□□□□ -2.15
RPA3P35244 MIR6715A-201ENST00000615929 79 ntBASIC1.59□□□□□ -2.15
RPA3P35244 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.59□□□□□ -2.16
RPA3P35244 AC092125.1-201ENST00000562568 1995 ntBASIC1.59□□□□□ -2.16
RPA3P35244 MTND5P10-201ENST00000603719 1809 ntBASIC1.59□□□□□ -2.16
RPA3P35244 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RPA3P35244 RNU6-1284P-201ENST00000363701 100 ntBASIC1.58□□□□□ -2.16
RPA3P35244 RNA5SP190-201ENST00000365222 118 ntBASIC1.58□□□□□ -2.16
RPA3P35244 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
RPA3P35244 U8.14-201ENST00000390843 143 ntBASIC1.58□□□□□ -2.16
RPA3P35244 AC019070.1-201ENST00000415008 1024 ntBASIC1.58□□□□□ -2.16
RPA3P35244 AP000949.1-201ENST00000438328 629 ntBASIC1.58□□□□□ -2.16
RPA3P35244 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.58□□□□□ -2.16
RPA3P35244 MTND4P25-201ENST00000441039 533 ntBASIC1.58□□□□□ -2.16
RPA3P35244 RPL23AP6-201ENST00000446637 472 ntBASIC1.58□□□□□ -2.16
RPA3P35244 SSXP1-201ENST00000453640 473 ntBASIC1.58□□□□□ -2.16
RPA3P35244 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.58□□□□□ -2.16
RPA3P35244 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.58□□□□□ -2.16
RPA3P35244 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
RPA3P35244 LINC00933-203ENST00000559812 219 ntBASIC1.58□□□□□ -2.16
RPA3P35244 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
RPA3P35244 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.58□□□□□ -2.16
RPA3P35244 AC005296.1-201ENST00000616145 209 ntBASIC1.58□□□□□ -2.16
RPA3P35244 AC091953.2-201ENST00000623979 160 ntBASIC1.58□□□□□ -2.16
RPA3P35244 AC017037.3-201ENST00000625016 472 ntBASIC1.58□□□□□ -2.16
RPA3P35244 Z99571.1-201ENST00000636677 394 ntBASIC1.58□□□□□ -2.16
RPA3P35244 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RPA3P35244 AC006026.1-201ENST00000444025 1803 ntBASIC1.58□□□□□ -2.16
RPA3P35244 AC008555.8-201ENST00000623602 2168 ntBASIC1.58□□□□□ -2.16
RPA3P35244 AP000776.1-201ENST00000530032 1663 ntBASIC1.58□□□□□ -2.16
RPA3P35244 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.57□□□□□ -2.16
RPA3P35244 RNU6-288P-201ENST00000363690 104 ntBASIC1.57□□□□□ -2.16
RPA3P35244 RN7SKP266-201ENST00000410232 287 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms