Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MIR6134-201ENST00000617606 109 ntBASIC0.77□□□□□ -2.29
CKS2P33552 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.77□□□□□ -2.29
CKS2P33552 AL121890.5-201ENST00000620848 304 ntBASIC0.77□□□□□ -2.29
CKS2P33552 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
CKS2P33552 MTND5P9-201ENST00000503854 1755 ntBASIC0.76□□□□□ -2.29
CKS2P33552 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
CKS2P33552 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CKS2P33552 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CKS2P33552 SNORA25.8-201ENST00000364831 128 ntBASIC0.76□□□□□ -2.29
CKS2P33552 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.76□□□□□ -2.29
CKS2P33552 ISCA1P1-201ENST00000426679 387 ntBASIC0.76□□□□□ -2.29
CKS2P33552 AC092427.1-201ENST00000439177 601 ntBASIC0.76□□□□□ -2.29
CKS2P33552 AC020550.1-201ENST00000447385 163 ntBASIC0.76□□□□□ -2.29
CKS2P33552 snoU13.8-201ENST00000458890 104 ntBASIC0.76□□□□□ -2.29
CKS2P33552 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.76□□□□□ -2.29
CKS2P33552 AC116655.1-201ENST00000508324 901 ntBASIC0.76□□□□□ -2.29
CKS2P33552 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.76□□□□□ -2.29
CKS2P33552 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.76□□□□□ -2.29
CKS2P33552 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.76□□□□□ -2.29
CKS2P33552 RNU5B-3P-201ENST00000516601 115 ntBASIC0.76□□□□□ -2.29
CKS2P33552 RNU6-714P-201ENST00000516963 103 ntBASIC0.76□□□□□ -2.29
CKS2P33552 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.76□□□□□ -2.29
CKS2P33552 AC093249.1-201ENST00000567049 203 ntBASIC0.76□□□□□ -2.29
CKS2P33552 HSPE1P19-201ENST00000603327 295 ntBASIC0.76□□□□□ -2.29
CKS2P33552 RNU6-91P-201ENST00000607774 107 ntBASIC0.76□□□□□ -2.29
CKS2P33552 AC097468.3-201ENST00000607956 456 ntBASIC0.76□□□□□ -2.29
CKS2P33552 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CKS2P33552 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.76□□□□□ -2.29
CKS2P33552 AC092125.1-201ENST00000562568 1995 ntBASIC0.76□□□□□ -2.29
CKS2P33552 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.75□□□□□ -2.29
CKS2P33552 OR5T3-201ENST00000303059 1023 ntBASIC0.75□□□□□ -2.29
CKS2P33552 RNA5SP327-201ENST00000362494 101 ntBASIC0.75□□□□□ -2.29
CKS2P33552 RNU6-359P-201ENST00000365466 108 ntBASIC0.75□□□□□ -2.29
CKS2P33552 AL590084.2-201ENST00000401481 382 ntBASIC0.75□□□□□ -2.29
CKS2P33552 RNU2-32P-201ENST00000411193 191 ntBASIC0.75□□□□□ -2.29
CKS2P33552 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CKS2P33552 SRIP3-201ENST00000413200 219 ntBASIC0.75□□□□□ -2.29
CKS2P33552 CYCSP49-201ENST00000420810 319 ntBASIC0.75□□□□□ -2.29
CKS2P33552 AC092634.2-201ENST00000428146 1010 ntBASIC0.75□□□□□ -2.29
CKS2P33552 GPM6BP2-201ENST00000432046 144 ntBASIC0.75□□□□□ -2.29
CKS2P33552 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.75□□□□□ -2.29
CKS2P33552 MTATP6P30-201ENST00000443540 664 ntBASIC0.75□□□□□ -2.29
CKS2P33552 GDI2P2-201ENST00000445131 608 ntBASIC0.75□□□□□ -2.29
CKS2P33552 GPM6BP1-201ENST00000446387 144 ntBASIC0.75□□□□□ -2.29
CKS2P33552 DUXAP8-207ENST00000456786 622 ntBASIC0.75□□□□□ -2.29
CKS2P33552 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.75□□□□□ -2.29
CKS2P33552 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.75□□□□□ -2.29
CKS2P33552 AC093852.1-201ENST00000503587 266 ntBASIC0.75□□□□□ -2.29
CKS2P33552 AC109927.2-201ENST00000506416 303 ntBASIC0.75□□□□□ -2.29
CKS2P33552 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.75□□□□□ -2.29
CKS2P33552 AP003392.2-201ENST00000527269 208 ntBASIC0.75□□□□□ -2.29
CKS2P33552 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.75□□□□□ -2.29
CKS2P33552 AC090115.3-201ENST00000553218 849 ntBASIC0.75□□□□□ -2.29
CKS2P33552 LINC00557-201ENST00000563184 1279 ntBASIC0.75□□□□□ -2.29
CKS2P33552 AC107952.2-201ENST00000606048 486 ntBASIC0.75□□□□□ -2.29
CKS2P33552 MIR6798-201ENST00000612887 67 ntBASIC0.75□□□□□ -2.29
CKS2P33552 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.75□□□□□ -2.29
CKS2P33552 TEX21P-201ENST00000447107 1476 ntBASIC0.74□□□□□ -2.29
CKS2P33552 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.74□□□□□ -2.29
CKS2P33552 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
CKS2P33552 SNORA70.7-201ENST00000384159 133 ntBASIC0.74□□□□□ -2.29
CKS2P33552 RPL37P10-201ENST00000412884 288 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.74□□□□□ -2.29
CKS2P33552 AL022400.1-201ENST00000423946 935 ntBASIC0.74□□□□□ -2.29
CKS2P33552 TOMM20P4-201ENST00000427861 435 ntBASIC0.74□□□□□ -2.29
CKS2P33552 HMGB1P27-201ENST00000431429 603 ntBASIC0.74□□□□□ -2.29
CKS2P33552 COX7BP2-201ENST00000437976 242 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AL022238.1-201ENST00000442557 355 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.74□□□□□ -2.29
CKS2P33552 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.74□□□□□ -2.29
CKS2P33552 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.74□□□□□ -2.29
CKS2P33552 MTCYBP43-201ENST00000513621 740 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.74□□□□□ -2.29
CKS2P33552 RNU6-1261P-201ENST00000517194 104 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AC084364.2-201ENST00000546924 395 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AC136619.2-201ENST00000563361 631 ntBASIC0.74□□□□□ -2.29
CKS2P33552 MIR4421-201ENST00000578133 69 ntBASIC0.74□□□□□ -2.29
CKS2P33552 SNORD114-21-201ENST00000606412 72 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AL078604.3-201ENST00000615580 211 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AC013470.4-201ENST00000619978 986 ntBASIC0.74□□□□□ -2.29
CKS2P33552 AC009268.2-201ENST00000621925 457 ntBASIC0.74□□□□□ -2.29
CKS2P33552 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.74□□□□□ -2.29
CKS2P33552 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CKS2P33552 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CKS2P33552 RNU6-343P-201ENST00000364709 104 ntBASIC0.73□□□□□ -2.29
CKS2P33552 SNORD1A-201ENST00000364968 72 ntBASIC0.73□□□□□ -2.29
CKS2P33552 RNU6-1280P-201ENST00000365211 107 ntBASIC0.73□□□□□ -2.29
CKS2P33552 RNU6-1300P-201ENST00000391046 108 ntBASIC0.73□□□□□ -2.29
CKS2P33552 RNU6-932P-201ENST00000391108 106 ntBASIC0.73□□□□□ -2.29
CKS2P33552 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CKS2P33552 NCOR1P3-201ENST00000420479 303 ntBASIC0.73□□□□□ -2.29
CKS2P33552 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.73□□□□□ -2.29
CKS2P33552 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.73□□□□□ -2.29
CKS2P33552 AC027119.1-201ENST00000440877 241 ntBASIC0.73□□□□□ -2.29
CKS2P33552 RPL39P29-201ENST00000447779 157 ntBASIC0.73□□□□□ -2.29
CKS2P33552 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.73□□□□□ -2.29
CKS2P33552 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.73□□□□□ -2.29
CKS2P33552 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.73□□□□□ -2.29
CKS2P33552 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.73□□□□□ -2.29
CKS2P33552 ZNF971P-201ENST00000562068 1249 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms