Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA11P31270 AC004801.2-202ENST00000463559 283 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RPL21P99-201ENST00000480369 423 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RN7SL20P-201ENST00000488827 297 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RNU4-49P-201ENST00000516080 140 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RNU6-1153P-201ENST00000516760 105 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RNA5SP503-201ENST00000517047 117 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA11P31270 HMGN1P28-201ENST00000521340 364 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA11P31270 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA11P31270 OR4H12P-201ENST00000556269 907 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA11P31270 AC022432.1-201ENST00000595739 310 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 TUG1_2.1-201ENST00000614234 87 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 AC007318.2-201ENST00000620999 243 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA11P31270 MIR1302-1-201ENST00000637932 143 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA11P31270 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA11P31270 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA11P31270 MTCO1P9-201ENST00000505577 1534 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 Y_RNA.301-201ENST00000364990 103 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 SNORA24.1-201ENST00000384401 135 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 RNU6-831P-201ENST00000384548 107 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 Y_RNA.530-201ENST00000384587 101 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 USP9YP20-201ENST00000419224 558 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA11P31270 AC018630.2-202ENST00000422992 927 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA11P31270 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA11P31270 AC024082.2-201ENST00000434771 238 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA11P31270 NDUFB4P6-201ENST00000436819 366 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA11P31270 MTCO3P45-201ENST00000443036 613 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA11P31270 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA11P31270 RNU6-1208P-201ENST00000459588 107 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA11P31270 RPL23AP14-201ENST00000468281 468 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 RPS4XP22-201ENST00000480755 780 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 RPS15AP36-201ENST00000492022 382 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 MTCO1P29-201ENST00000496868 288 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 TTC39CP1-201ENST00000512513 755 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 RNU6-685P-201ENST00000517088 95 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA11P31270 BTF3P12-201ENST00000519620 469 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 RPL7P20-201ENST00000520308 745 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA11P31270 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.28□□□□□ -1.88
HOXA11P31270 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA11P31270 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA11P31270 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.28□□□□□ -1.88
HOXA11P31270 AC243960.4-201ENST00000600532 288 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL670379.6-201ENST00000603753 252 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL670379.11-201ENST00000604059 253 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AC008162.1-201ENST00000604718 254 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL670379.1-201ENST00000604752 252 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL670379.5-201ENST00000605253 252 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL670379.12-201ENST00000605291 253 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL670379.8-201ENST00000605353 252 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AL670379.7-201ENST00000605823 252 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 AC126177.8-201ENST00000618339 1015 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA11P31270 AC025034.2-201ENST00000623264 286 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA11P31270 SRP72P2-201ENST00000344851 1979 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 FAM35BP-202ENST00000497389 3337 ntBASIC3.28□□□□□ -1.88
HOXA11P31270 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA11P31270 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA11P31270 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
HOXA11P31270 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA11P31270 MAPK10-322ENST00000641485 4530 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
HOXA11P31270 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA11P31270 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HOXA11P31270 DDX10P1-201ENST00000448545 1933 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 TPTE2P4-201ENST00000258589 1605 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 FAM35CP-201ENST00000554755 2470 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA11P31270 Y_RNA.212-201ENST00000364177 102 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 Y_RNA.510-201ENST00000384511 114 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 MIR135A2-201ENST00000384854 100 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AL592114.1-201ENST00000403842 483 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AL606923.1-201ENST00000406616 190 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 RNU4-46P-201ENST00000410818 138 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXA11P31270 EEF1A1P41-201ENST00000414667 207 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 ATG3P1-201ENST00000419507 911 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AC005534.2-201ENST00000431047 433 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA11P31270 AC025750.2-201ENST00000442609 450 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AL590639.1-201ENST00000456484 337 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AL162395.1-201ENST00000457882 422 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AC092798.1-201ENST00000458542 409 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 SNORA59A-201ENST00000459326 152 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms