Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 OR6C5P-201ENST00000452388 923 ntBASIC1.2□□□□□ -2.22
CASP1P29466 AL137159.1-201ENST00000452808 512 ntBASIC1.2□□□□□ -2.22
CASP1P29466 MTND1P9-201ENST00000453775 944 ntBASIC1.2□□□□□ -2.22
CASP1P29466 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.2□□□□□ -2.22
CASP1P29466 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.2□□□□□ -2.22
CASP1P29466 SLC2A13P1-201ENST00000531560 322 ntBASIC1.2□□□□□ -2.22
CASP1P29466 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.2□□□□□ -2.22
CASP1P29466 HIGD1AP17-201ENST00000554576 276 ntBASIC1.2□□□□□ -2.22
CASP1P29466 LINC00557-201ENST00000563184 1279 ntBASIC1.2□□□□□ -2.22
CASP1P29466 AC026271.5-201ENST00000577873 130 ntBASIC1.2□□□□□ -2.22
CASP1P29466 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.2□□□□□ -2.22
CASP1P29466 AC016925.2-201ENST00000605108 242 ntBASIC1.2□□□□□ -2.22
CASP1P29466 NDUFA8P1-201ENST00000605525 367 ntBASIC1.2□□□□□ -2.22
CASP1P29466 AL583856.2-201ENST00000606298 543 ntBASIC1.2□□□□□ -2.22
CASP1P29466 AC092953.2-201ENST00000608000 699 ntBASIC1.2□□□□□ -2.22
CASP1P29466 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.2□□□□□ -2.22
CASP1P29466 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CASP1P29466 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CASP1P29466 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
CASP1P29466 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CASP1P29466 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
CASP1P29466 RNU5B-1-201ENST00000363286 116 ntBASIC1.19□□□□□ -2.22
CASP1P29466 SNORD14B-201ENST00000364533 90 ntBASIC1.19□□□□□ -2.22
CASP1P29466 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CASP1P29466 RNU2-42P-201ENST00000410697 113 ntBASIC1.19□□□□□ -2.22
CASP1P29466 MTND1P21-201ENST00000412991 285 ntBASIC1.19□□□□□ -2.22
CASP1P29466 AC244035.1-201ENST00000430042 390 ntBASIC1.19□□□□□ -2.22
CASP1P29466 MTCO3P45-201ENST00000443036 613 ntBASIC1.19□□□□□ -2.22
CASP1P29466 AC079776.3-201ENST00000450665 370 ntBASIC1.19□□□□□ -2.22
CASP1P29466 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CASP1P29466 HMGB1P28-201ENST00000507778 552 ntBASIC1.19□□□□□ -2.22
CASP1P29466 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.19□□□□□ -2.22
CASP1P29466 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
CASP1P29466 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.19□□□□□ -2.22
CASP1P29466 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.19□□□□□ -2.22
CASP1P29466 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.19□□□□□ -2.22
CASP1P29466 MRPS36P5-201ENST00000551909 298 ntBASIC1.19□□□□□ -2.22
CASP1P29466 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.19□□□□□ -2.22
CASP1P29466 AL356432.3-201ENST00000568952 465 ntBASIC1.19□□□□□ -2.22
CASP1P29466 MIR3198-2-201ENST00000577868 80 ntBASIC1.19□□□□□ -2.22
CASP1P29466 BBIP1P1-201ENST00000602999 279 ntBASIC1.19□□□□□ -2.22
CASP1P29466 AC021171.1-201ENST00000603137 706 ntBASIC1.19□□□□□ -2.22
CASP1P29466 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.19□□□□□ -2.22
CASP1P29466 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.19□□□□□ -2.22
CASP1P29466 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CASP1P29466 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CASP1P29466 ZNF29P-201ENST00000225587 168 ntBASIC1.18□□□□□ -2.22
CASP1P29466 NACAP2-201ENST00000318548 624 ntBASIC1.18□□□□□ -2.22
CASP1P29466 RNU6-1032P-201ENST00000384100 107 ntBASIC1.18□□□□□ -2.22
CASP1P29466 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.18□□□□□ -2.22
CASP1P29466 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.18□□□□□ -2.22
CASP1P29466 EIF4EP2-201ENST00000422816 654 ntBASIC1.18□□□□□ -2.22
CASP1P29466 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.18□□□□□ -2.22
CASP1P29466 MTCO1P3-201ENST00000429327 192 ntBASIC1.18□□□□□ -2.22
CASP1P29466 GPM6BP2-201ENST00000432046 144 ntBASIC1.18□□□□□ -2.22
CASP1P29466 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.18□□□□□ -2.22
CASP1P29466 GPM6BP1-201ENST00000446387 144 ntBASIC1.18□□□□□ -2.22
CASP1P29466 ARPC3P5-201ENST00000448802 534 ntBASIC1.18□□□□□ -2.22
CASP1P29466 HMGN2P18-201ENST00000450680 270 ntBASIC1.18□□□□□ -2.22
CASP1P29466 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.18□□□□□ -2.22
CASP1P29466 RNA5SP57-201ENST00000459463 123 ntBASIC1.18□□□□□ -2.22
CASP1P29466 RPL30P12-201ENST00000474666 353 ntBASIC1.18□□□□□ -2.22
CASP1P29466 AC139453.3-201ENST00000493276 369 ntBASIC1.18□□□□□ -2.22
CASP1P29466 AC093752.1-206ENST00000511823 336 ntBASIC1.18□□□□□ -2.22
CASP1P29466 RNU6-678P-201ENST00000516832 109 ntBASIC1.18□□□□□ -2.22
CASP1P29466 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.18□□□□□ -2.22
CASP1P29466 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.18□□□□□ -2.22
CASP1P29466 CYCSP27-201ENST00000527643 293 ntBASIC1.18□□□□□ -2.22
CASP1P29466 OR5B19P-201ENST00000531766 928 ntBASIC1.18□□□□□ -2.22
CASP1P29466 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.18□□□□□ -2.22
CASP1P29466 OR6C7P-201ENST00000547875 934 ntBASIC1.18□□□□□ -2.22
CASP1P29466 SUB1P3-201ENST00000564581 315 ntBASIC1.18□□□□□ -2.22
CASP1P29466 AL353997.4-201ENST00000586196 166 ntBASIC1.18□□□□□ -2.22
CASP1P29466 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.18□□□□□ -2.22
CASP1P29466 AC091057.3-201ENST00000602684 733 ntBASIC1.18□□□□□ -2.22
CASP1P29466 SNRPGP17-201ENST00000603780 214 ntBASIC1.18□□□□□ -2.22
CASP1P29466 DPPA3P3-201ENST00000603842 430 ntBASIC1.18□□□□□ -2.22
CASP1P29466 AC138627.2-201ENST00000624202 601 ntBASIC1.18□□□□□ -2.22
CASP1P29466 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CASP1P29466 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CASP1P29466 CDR1-202ENST00000625883 1485 ntBASIC1.18□□□□□ -2.22
CASP1P29466 SNORD115-3-201ENST00000363100 82 ntBASIC1.17□□□□□ -2.22
CASP1P29466 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CASP1P29466 RNU6-354P-201ENST00000383862 107 ntBASIC1.17□□□□□ -2.22
CASP1P29466 RNU6-432P-201ENST00000384196 109 ntBASIC1.17□□□□□ -2.22
CASP1P29466 RNU6-610P-201ENST00000384264 107 ntBASIC1.17□□□□□ -2.22
CASP1P29466 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CASP1P29466 AL133475.1-201ENST00000404414 305 ntBASIC1.17□□□□□ -2.22
CASP1P29466 AC127391.1-201ENST00000411737 98 ntBASIC1.17□□□□□ -2.22
CASP1P29466 USP9YP26-201ENST00000421008 661 ntBASIC1.17□□□□□ -2.22
CASP1P29466 ISCA1P1-201ENST00000426679 387 ntBASIC1.17□□□□□ -2.22
CASP1P29466 AC092634.2-201ENST00000428146 1010 ntBASIC1.17□□□□□ -2.22
CASP1P29466 AL592045.1-201ENST00000429867 352 ntBASIC1.17□□□□□ -2.22
CASP1P29466 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.17□□□□□ -2.22
CASP1P29466 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.17□□□□□ -2.22
CASP1P29466 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.17□□□□□ -2.22
CASP1P29466 KATNBL1P6-201ENST00000453433 915 ntBASIC1.17□□□□□ -2.22
CASP1P29466 AL441985.1-201ENST00000457727 251 ntBASIC1.17□□□□□ -2.22
CASP1P29466 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.17□□□□□ -2.22
CASP1P29466 AC006512.1-201ENST00000468816 291 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms