Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.34□□□□□ -2.04
PTPN6P29350 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN6P29350 CDC27P3-201ENST00000635418 1910 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN6P29350 U3.12-201ENST00000364498 214 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 RNY4P34-201ENST00000364779 95 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 MIR558-201ENST00000384920 94 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 SNORA40C-201ENST00000391285 128 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 U3.37-201ENST00000408528 213 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 RNU2-39P-201ENST00000410604 198 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 RPS3AP3-201ENST00000411933 242 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC114491.1-201ENST00000416095 246 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC009518.2-201ENST00000418056 731 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 CYCSP46-201ENST00000423569 204 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.33□□□□□ -2.04
PTPN6P29350 MED13P1-201ENST00000428342 171 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN6P29350 CR769767.1-201ENST00000436337 346 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 MTND6P13-201ENST00000443510 523 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 RPL32P28-201ENST00000443577 397 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN6P29350 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN6P29350 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN6P29350 AC003071.1-201ENST00000451219 789 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AP001324.2-201ENST00000461163 319 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.33□□□□□ -2.04
PTPN6P29350 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN6P29350 AC023194.1-201ENST00000493084 308 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 RPL22P13-201ENST00000493291 347 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC116655.1-201ENST00000508324 901 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN6P29350 AC117522.1-201ENST00000509821 380 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN6P29350 AC108078.2-201ENST00000510750 236 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN6P29350 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 RNA5SP82-201ENST00000516707 92 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN6P29350 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.33□□□□□ -2.04
PTPN6P29350 AC234778.2-201ENST00000566241 354 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC009127.3-201ENST00000570531 403 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 MIR3682-201ENST00000581338 84 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC005771.1-201ENST00000585581 349 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 NRBF2P1-201ENST00000587407 859 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC008121.1-201ENST00000603244 268 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 AC091304.9-201ENST00000612091 226 ntBASIC2.33□□□□□ -2.04
PTPN6P29350 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN6P29350 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PTPN6P29350 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PTPN6P29350 AP000568.1-201ENST00000282964 442 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PTPN6P29350 MIR518C-201ENST00000384822 101 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PTPN6P29350 AL049545.1-201ENST00000401856 572 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AC107081.1-201ENST00000414975 361 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 CYCSP48-201ENST00000417124 323 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN6P29350 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 RPS3AP44-201ENST00000425466 790 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN6P29350 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN6P29350 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.32□□□□□ -2.04
PTPN6P29350 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.32□□□□□ -2.04
PTPN6P29350 PGBD4P3-201ENST00000440731 581 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.32□□□□□ -2.04
PTPN6P29350 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN6P29350 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PTPN6P29350 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN6P29350 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.32□□□□□ -2.04
PTPN6P29350 HMGB3P3-201ENST00000510526 400 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AC022616.3-201ENST00000523940 148 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 DUXAP5-201ENST00000529668 529 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AL139286.2-201ENST00000606838 396 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AC104237.2-201ENST00000612456 443 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AC012409.4-201ENST00000612923 249 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AC120349.3-201ENST00000624377 529 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.32□□□□□ -2.04
PTPN6P29350 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 AC069528.2-201ENST00000624849 1991 ntBASIC2.32□□□□□ -2.04
PTPN6P29350 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN6P29350 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN6P29350 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN6P29350 RNU6-166P-201ENST00000384371 107 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 RNU6-748P-201ENST00000384648 107 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 SNORA41-201ENST00000384675 132 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 SNORA40.3-201ENST00000390964 122 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 SNORA26.8-201ENST00000391306 124 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
PTPN6P29350 RN7SKP284-201ENST00000411002 343 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 HMGN1P14-201ENST00000412459 517 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN6P29350 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN6P29350 EIF4EP4-201ENST00000424916 578 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.31□□□□□ -2.04
PTPN6P29350 AC092447.3-201ENST00000426027 686 ntBASIC2.31□□□□□ -2.04
PTPN6P29350 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.31□□□□□ -2.04
PTPN6P29350 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.31□□□□□ -2.04
PTPN6P29350 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms