Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.81□□□□□ -1.8
XPAP23025 RNU6-1045P-201ENST00000516321 107 ntBASIC3.81□□□□□ -1.8
XPAP23025 RNA5SP384-201ENST00000516615 116 ntBASIC3.81□□□□□ -1.8
XPAP23025 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.81□□□□□ -1.8
XPAP23025 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.81□□□□□ -1.8
XPAP23025 AC022634.1-201ENST00000520765 532 ntBASIC3.81□□□□□ -1.8
XPAP23025 ATP5F1P5-201ENST00000526403 760 ntBASIC3.81□□□□□ -1.8
XPAP23025 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.81□□□□□ -1.8
XPAP23025 AC011494.1-201ENST00000596454 237 ntBASIC3.81□□□□□ -1.8
XPAP23025 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.81□□□□□ -1.8
XPAP23025 CYP2C61P-201ENST00000604072 290 ntBASIC3.81□□□□□ -1.8
XPAP23025 AC136601.2-201ENST00000604356 474 ntBASIC3.81□□□□□ -1.8
XPAP23025 AC007938.3-201ENST00000604965 623 ntBASIC3.81□□□□□ -1.8
XPAP23025 AC004805.2-201ENST00000605382 482 ntBASIC3.81□□□□□ -1.8
XPAP23025 AL162730.1-201ENST00000605734 292 ntBASIC3.81□□□□□ -1.8
XPAP23025 PISRT1.1-201ENST00000616930 107 ntBASIC3.81□□□□□ -1.8
XPAP23025 AC068831.7-201ENST00000616954 363 ntBASIC3.81□□□□□ -1.8
XPAP23025 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.81□□□□□ -1.8
XPAP23025 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.81□□□□□ -1.8
XPAP23025 AC007785.2-201ENST00000598627 1916 ntBASIC3.81□□□□□ -1.8
XPAP23025 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.81□□□□□ -1.8
XPAP23025 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.81□□□□□ -1.8
XPAP23025 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.81□□□□□ -1.8
XPAP23025 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
XPAP23025 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.8□□□□□ -1.8
XPAP23025 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XPAP23025 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XPAP23025 RNU6-1115P-201ENST00000362490 106 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-37P-201ENST00000362692 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-11P-201ENST00000364234 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-7-201ENST00000364784 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-8-201ENST00000365467 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.8□□□□□ -1.8
XPAP23025 RNU6-25P-201ENST00000383873 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-1-201ENST00000383898 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-1040P-201ENST00000383974 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-48P-201ENST00000384161 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-36P-201ENST00000384172 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-4P-201ENST00000384205 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-5P-201ENST00000384238 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-842P-201ENST00000384269 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-3P-201ENST00000384314 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-16P-201ENST00000384385 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-15P-201ENST00000384534 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-2-201ENST00000384627 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-29P-201ENST00000384637 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-9-201ENST00000384776 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-33P-201ENST00000384793 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.8□□□□□ -1.8
XPAP23025 Z99755.1-201ENST00000414048 380 ntBASIC3.8□□□□□ -1.8
XPAP23025 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.8□□□□□ -1.8
XPAP23025 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.8□□□□□ -1.8
XPAP23025 AL645568.3-201ENST00000433683 316 ntBASIC3.8□□□□□ -1.8
XPAP23025 RPL21P23-201ENST00000446654 460 ntBASIC3.8□□□□□ -1.8
XPAP23025 FTH1P25-201ENST00000447665 469 ntBASIC3.8□□□□□ -1.8
XPAP23025 U3.44-201ENST00000458938 192 ntBASIC3.8□□□□□ -1.8
XPAP23025 AL135752.1-201ENST00000479477 471 ntBASIC3.8□□□□□ -1.8
XPAP23025 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.8□□□□□ -1.8
XPAP23025 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.8□□□□□ -1.8
XPAP23025 CASP1P1-201ENST00000526345 212 ntBASIC3.8□□□□□ -1.8
XPAP23025 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.8□□□□□ -1.8
XPAP23025 AC008962.1-201ENST00000605729 304 ntBASIC3.8□□□□□ -1.8
XPAP23025 RNU6-6P-201ENST00000606623 107 ntBASIC3.8□□□□□ -1.8
XPAP23025 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.8□□□□□ -1.8
XPAP23025 MTND5P30-201ENST00000452896 1731 ntBASIC3.8□□□□□ -1.8
XPAP23025 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XPAP23025 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XPAP23025 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
XPAP23025 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
XPAP23025 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
XPAP23025 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
XPAP23025 MIR412-201ENST00000362142 91 ntBASIC3.79□□□□□ -1.8
XPAP23025 Y_RNA.112-201ENST00000363250 102 ntBASIC3.79□□□□□ -1.8
XPAP23025 SNORD14B-201ENST00000364533 90 ntBASIC3.79□□□□□ -1.8
XPAP23025 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
XPAP23025 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
XPAP23025 RNU6-1160P-201ENST00000384546 104 ntBASIC3.79□□□□□ -1.8
XPAP23025 MIR517A-201ENST00000385001 87 ntBASIC3.79□□□□□ -1.8
XPAP23025 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
XPAP23025 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
XPAP23025 RNU6-1197P-201ENST00000391183 107 ntBASIC3.79□□□□□ -1.8
XPAP23025 HLFP1-201ENST00000402375 499 ntBASIC3.79□□□□□ -1.8
XPAP23025 TMEM167AP1-201ENST00000423409 219 ntBASIC3.79□□□□□ -1.8
XPAP23025 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.79□□□□□ -1.8
XPAP23025 AC097713.2-201ENST00000430199 356 ntBASIC3.79□□□□□ -1.8
XPAP23025 AC092573.2-201ENST00000434546 243 ntBASIC3.79□□□□□ -1.8
XPAP23025 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.79□□□□□ -1.8
XPAP23025 AL133547.1-201ENST00000448546 220 ntBASIC3.79□□□□□ -1.8
XPAP23025 AL133162.1-201ENST00000463228 453 ntBASIC3.79□□□□□ -1.8
XPAP23025 AC018437.1-201ENST00000492214 406 ntBASIC3.79□□□□□ -1.8
XPAP23025 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.79□□□□□ -1.8
XPAP23025 SCARNA14-201ENST00000516903 136 ntBASIC3.79□□□□□ -1.8
XPAP23025 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.79□□□□□ -1.8
XPAP23025 AC006504.6-201ENST00000590142 199 ntBASIC3.79□□□□□ -1.8
XPAP23025 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.79□□□□□ -1.8
XPAP23025 AL121917.1-203ENST00000605534 577 ntBASIC3.79□□□□□ -1.8
XPAP23025 AC006111.3-201ENST00000622137 383 ntBASIC3.79□□□□□ -1.8
XPAP23025 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.79□□□□□ -1.8
XPAP23025 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
XPAP23025 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms