Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 RNA5SP240-201ENST00000365355 128 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 Y_RNA.623-201ENST00000411128 95 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AL365338.1-201ENST00000422282 858 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 UBE2D3P4-201ENST00000441973 436 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 RPS27P27-201ENST00000498779 255 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC005178.1-201ENST00000508392 440 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC108078.2-201ENST00000510750 236 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 RPL23AP94-201ENST00000512518 302 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 OR5AQ1P-201ENST00000527596 927 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AP001646.1-201ENST00000527936 915 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 FAM92A1P1-201ENST00000528023 890 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC096772.1-201ENST00000609146 564 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 MIR6895-201ENST00000613497 78 ntBASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DPA1P20036 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 MIR412-201ENST00000362142 91 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 RNU1-72P-201ENST00000362976 153 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 U8.8-201ENST00000365399 135 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 SNORD23.1-201ENST00000408212 104 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 U3.37-201ENST00000408528 213 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 RNU2-39P-201ENST00000410604 198 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AF274854.1-201ENST00000413236 615 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 RPS24P1-201ENST00000438550 371 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC016691.1-201ENST00000441321 413 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AL513328.1-201ENST00000446460 224 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC012308.1-201ENST00000451232 178 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC022493.1-201ENST00000492984 337 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC112673.1-201ENST00000513168 575 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 RNU6-123P-201ENST00000516163 102 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 Y_RNA.672-201ENST00000516289 104 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 RNU7-193P-201ENST00000516723 65 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AP003467.2-201ENST00000520175 319 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC118273.2-201ENST00000532092 465 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 ZNF321P-202ENST00000550843 495 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 PSMA3P-201ENST00000555485 635 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC027176.1-201ENST00000560204 514 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 MYL12BP1-201ENST00000569826 507 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AL139286.2-201ENST00000606838 396 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC012409.4-201ENST00000612923 249 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 U6.42-201ENST00000618440 107 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.44□□□□□ -2.02
HLA-DPA1P20036 MIR1291-201ENST00000627649 87 ntBASIC2.44□□□□□ -2.02
HLA-DPA1P20036 AC103710.2-202ENST00000641454 2853 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 RNU4-82P-201ENST00000362443 140 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 SNORA25.6-201ENST00000364121 118 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 SNORD114-30-201ENST00000364448 72 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 RNU6-641P-201ENST00000384006 107 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 Y_RNA.560-201ENST00000384689 102 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 CISD1P1-201ENST00000393907 327 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AL160275.3-201ENST00000423876 471 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AL161788.1-201ENST00000441805 169 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 snoU109.2-201ENST00000459316 135 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AC117503.1-201ENST00000472241 394 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 RPL30P6-201ENST00000475925 342 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 RPL7P43-201ENST00000478876 753 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AC117522.2-201ENST00000510049 657 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DPA1P20036 RN7SKP287-201ENST00000516546 266 ntBASIC2.43□□□□□ -2.02
HLA-DPA1P20036 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms