Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 Y_RNA.252-201ENST00000364556 101 ntBASIC3.69□□□□□ -1.82
COL11A2P13942 SNORD115-7-201ENST00000365306 82 ntBASIC3.69□□□□□ -1.82
COL11A2P13942 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.69□□□□□ -1.82
COL11A2P13942 Y_RNA.493-201ENST00000384422 102 ntBASIC3.69□□□□□ -1.82
COL11A2P13942 RNA5SP107-201ENST00000411358 122 ntBASIC3.69□□□□□ -1.82
COL11A2P13942 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.69□□□□□ -1.82
COL11A2P13942 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.69□□□□□ -1.82
COL11A2P13942 CALM2P2-201ENST00000428512 440 ntBASIC3.69□□□□□ -1.82
COL11A2P13942 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL11A2P13942 AC015911.1-201ENST00000495111 156 ntBASIC3.69□□□□□ -1.82
COL11A2P13942 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.69□□□□□ -1.82
COL11A2P13942 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.69□□□□□ -1.82
COL11A2P13942 RNU6-1069P-201ENST00000516612 133 ntBASIC3.69□□□□□ -1.82
COL11A2P13942 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.69□□□□□ -1.82
COL11A2P13942 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL11A2P13942 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.69□□□□□ -1.82
COL11A2P13942 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
COL11A2P13942 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.69□□□□□ -1.82
COL11A2P13942 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL11A2P13942 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
COL11A2P13942 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
COL11A2P13942 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
COL11A2P13942 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL11A2P13942 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.68□□□□□ -1.82
COL11A2P13942 Y_RNA.148-201ENST00000363557 117 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 Y_RNA.212-201ENST00000364177 102 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 RNU6-188P-201ENST00000364207 107 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 Y_RNA.404-201ENST00000383978 102 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 Y_RNA.476-201ENST00000384347 108 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 SNORA24.1-201ENST00000384401 135 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 Y_RNA.646-201ENST00000410980 101 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 HMGB3P2-201ENST00000411913 584 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 AC087499.2-201ENST00000432861 149 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.68□□□□□ -1.82
COL11A2P13942 RNU6-470P-201ENST00000515954 104 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 AP005902.1-201ENST00000521358 186 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 AC005357.1-201ENST00000588399 301 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.68□□□□□ -1.82
COL11A2P13942 AC009570.1-201ENST00000609599 745 ntBASIC3.68□□□□□ -1.82
COL11A2P13942 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.68□□□□□ -1.82
COL11A2P13942 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL11A2P13942 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.68□□□□□ -1.82
COL11A2P13942 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL11A2P13942 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.68□□□□□ -1.82
COL11A2P13942 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL11A2P13942 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL11A2P13942 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
COL11A2P13942 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL11A2P13942 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
COL11A2P13942 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A2P13942 SNORA63.7-201ENST00000365579 123 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 Y_RNA.463-201ENST00000384271 102 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 RNU6-1127P-201ENST00000384580 107 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 RNU6-310P-201ENST00000384655 107 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
COL11A2P13942 RNU2-21P-201ENST00000410368 188 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 RNU4-46P-201ENST00000410818 138 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 RAC1P6-201ENST00000423911 575 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AC008267.5-201ENST00000424928 265 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A2P13942 HIGD1AP11-201ENST00000438361 280 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 DYNLL1P5-201ENST00000467158 270 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 RPL30P11-201ENST00000495304 339 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AC008526.1-201ENST00000509149 338 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 MIR2114-201ENST00000516645 80 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AC109329.2-201ENST00000519658 482 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AC100870.1-201ENST00000522035 505 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A2P13942 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A2P13942 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.67□□□□□ -1.82
COL11A2P13942 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A2P13942 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A2P13942 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A2P13942 AC244205.2-202ENST00000635781 342 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 SCN1A-220ENST00000641603 12506 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A2P13942 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A2P13942 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A2P13942 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
COL11A2P13942 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A2P13942 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
COL11A2P13942 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A2P13942 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.67□□□□□ -1.82
COL11A2P13942 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A2P13942 RNU6-1284P-201ENST00000363701 100 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A2P13942 RNU6-784P-201ENST00000384330 106 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 Y_RNA.645-201ENST00000391229 102 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 MIR1261-201ENST00000408659 82 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 RNU2-52P-201ENST00000410680 190 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 RHEBP3-201ENST00000411920 351 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A2P13942 AC092013.1-201ENST00000438795 332 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AL354710.1-201ENST00000453641 246 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A2P13942 RPS3P1-201ENST00000456781 192 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 SNORD5.1-201ENST00000458800 75 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 SNORD109B-201ENST00000458961 67 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 SNORD109A-201ENST00000459128 67 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 TRBV1-201ENST00000476502 284 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms