Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ITGA4P13612 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ITGA4P13612 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ITGA4P13612 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ITGA4P13612 RPL9P7-201ENST00000330965 580 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 RNA5SP322-201ENST00000363617 119 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 SNORA7.2-201ENST00000364446 145 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 U8.8-201ENST00000365399 135 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 RNU1-89P-201ENST00000384592 164 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AL138885.1-201ENST00000405921 675 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 Y_RNA.618-201ENST00000410949 107 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 CBX3P6-201ENST00000430257 527 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AL627311.1-201ENST00000431514 115 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 RPS15AP10-201ENST00000432472 382 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.24□□□□□ -1.73
ITGA4P13612 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.24□□□□□ -1.73
ITGA4P13612 AL513043.1-201ENST00000439124 535 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.24□□□□□ -1.73
ITGA4P13612 RPL9P9-202ENST00000466501 579 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 RPL21P13-201ENST00000488305 481 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.24□□□□□ -1.73
ITGA4P13612 AC114801.2-201ENST00000503825 781 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.24□□□□□ -1.73
ITGA4P13612 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.24□□□□□ -1.73
ITGA4P13612 SNORA31.19-201ENST00000517079 126 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.24□□□□□ -1.73
ITGA4P13612 AC107016.1-201ENST00000550463 337 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AP000787.2-201ENST00000604432 568 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.24□□□□□ -1.73
ITGA4P13612 AC007792.1-201ENST00000623023 402 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 FAM35DP-201ENST00000323387 2712 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ITGA4P13612 ZNF72P-201ENST00000425869 1908 ntBASIC4.24□□□□□ -1.73
ITGA4P13612 AC008669.1-201ENST00000565823 2178 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AL161912.2-201ENST00000565707 3007 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ITGA4P13612 RNA5SP124-201ENST00000362739 110 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 Y_RNA.106-201ENST00000363189 100 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 RNY3P11-201ENST00000364153 102 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 RNU4-42P-201ENST00000364738 142 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 Y_RNA.533-201ENST00000384596 114 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 RNU6-907P-201ENST00000390924 102 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 RNA5SP171-201ENST00000391071 115 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 NUP35P1-201ENST00000422734 947 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 TOMM20P4-201ENST00000427861 435 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AL590383.1-201ENST00000428602 75 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.23□□□□□ -1.73
ITGA4P13612 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.23□□□□□ -1.73
ITGA4P13612 AC133134.1-201ENST00000466800 359 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 RPL23AP45-201ENST00000476406 468 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 Y_RNA.687-201ENST00000516558 91 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 RNA5SP165-201ENST00000517142 115 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 RNA5SP291-201ENST00000517222 105 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AC022616.4-201ENST00000522985 181 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.23□□□□□ -1.73
ITGA4P13612 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.23□□□□□ -1.73
ITGA4P13612 AL158827.2-201ENST00000602494 330 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AC124312.5-201ENST00000604451 268 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.23□□□□□ -1.73
ITGA4P13612 AL591424.2-201ENST00000617023 128 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AC103858.2-201ENST00000621471 543 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.23□□□□□ -1.73
ITGA4P13612 AL691447.3-201ENST00000635020 330 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 AC012442.3-202ENST00000636742 206 ntBASIC4.23□□□□□ -1.73
ITGA4P13612 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
ITGA4P13612 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.23□□□□□ -1.73
ITGA4P13612 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ITGA4P13612 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ITGA4P13612 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
ITGA4P13612 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ITGA4P13612 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGA4P13612 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGA4P13612 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGA4P13612 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGA4P13612 AC018529.3-201ENST00000624212 2254 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AC007685.1-201ENST00000329806 452 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 RNU6-1318P-201ENST00000365389 103 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 MIR521-1-201ENST00000384902 87 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 RNU6-1109P-201ENST00000391187 107 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 SNORA40C-201ENST00000391285 128 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AL591034.2-201ENST00000402839 359 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.22□□□□□ -1.73
ITGA4P13612 RAB9AP3-201ENST00000412737 573 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AC007560.1-201ENST00000426912 237 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AC083863.1-201ENST00000438811 231 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 HMGB1P37-201ENST00000439613 609 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 RAB9AP1-201ENST00000449393 573 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 RNA5SP143-201ENST00000516936 115 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AC009812.2-201ENST00000517657 457 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AC131281.1-201ENST00000522984 164 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AP000889.1-201ENST00000530968 660 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AC103996.1-201ENST00000555468 102 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AC087499.8-201ENST00000578406 226 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 MIR4444-1-201ENST00000581696 74 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 MIR4444-2-201ENST00000584390 74 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.22□□□□□ -1.73
ITGA4P13612 AC020914.4-201ENST00000597690 277 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AC008121.1-201ENST00000603244 268 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 AL355297.3-201ENST00000604082 446 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms