Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXD8P13378 AL162151.2-201ENST00000448875 158 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 U8.22-201ENST00000459141 133 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 SEPT14P8-201ENST00000508026 178 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HOXD8P13378 RNA5SP143-201ENST00000516936 115 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXD8P13378 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD8P13378 AC005476.1-201ENST00000554427 397 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXD8P13378 AC090617.3-201ENST00000573670 475 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 MIR548AI-201ENST00000579940 88 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 AC053481.4-201ENST00000583164 216 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXD8P13378 AC140113.4-201ENST00000622087 222 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 AC090617.7-201ENST00000623952 126 ntBASIC4.7□□□□□ -1.66
HOXD8P13378 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD8P13378 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD8P13378 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXD8P13378 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXD8P13378 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD8P13378 RNU6-858P-201ENST00000362436 107 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 Y_RNA.291-201ENST00000364886 113 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 RNA5SP240-201ENST00000365355 128 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 RNU6-102P-201ENST00000384485 104 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 Y_RNA.506-201ENST00000384494 102 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 RNU6-125P-201ENST00000384505 107 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 RNU6-628P-201ENST00000410675 107 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXD8P13378 COX6CP10-201ENST00000416832 224 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 HIGD1AP2-201ENST00000446367 280 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 AL358232.1-201ENST00000448030 501 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD8P13378 FABP5P15-201ENST00000453566 214 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD8P13378 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD8P13378 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD8P13378 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD8P13378 BRDTP1-201ENST00000605735 677 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD8P13378 AC005086.4-201ENST00000623065 213 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD8P13378 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 MAPK10-349ENST00000641767 3661 ntBASIC4.69□□□□□ -1.66
HOXD8P13378 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD8P13378 AC233981.2-201ENST00000611524 1614 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
HOXD8P13378 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HOXD8P13378 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD8P13378 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD8P13378 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD8P13378 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD8P13378 AC007785.2-201ENST00000598627 1916 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXD8P13378 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD8P13378 Y_RNA.44-201ENST00000362676 108 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 Z82188.1-201ENST00000436709 154 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 RN7SKP46-201ENST00000515942 234 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 RNU6-496P-201ENST00000516145 99 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 RNA5SP291-201ENST00000517222 105 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 IFITM8P-201ENST00000522529 394 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD8P13378 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXD8P13378 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD8P13378 MIR4643-201ENST00000577473 78 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 MIR4286-201ENST00000580651 93 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD8P13378 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXD8P13378 AC112200.1-201ENST00000625015 234 ntBASIC4.68□□□□□ -1.66
HOXD8P13378 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD8P13378 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD8P13378 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD8P13378 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXD8P13378 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HOXD8P13378 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD8P13378 AC090740.1-201ENST00000623193 2262 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD8P13378 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD8P13378 RNU6-222P-201ENST00000362438 107 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 RNU6-1020P-201ENST00000363684 107 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 RNA5SP387-201ENST00000364226 106 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 RNU6-843P-201ENST00000384454 104 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 MIR1179-201ENST00000408703 91 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 AL356867.1-201ENST00000429623 299 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD8P13378 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD8P13378 ABCF2P2-201ENST00000450549 296 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 IFNWP4-201ENST00000453148 294 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 snoU109.2-201ENST00000459316 135 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 RPS29P27-201ENST00000463711 170 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms